Information for 7-KATCACGAAYAGC (Motif 18)

A C G T C G T A A C G T A T G C G T C A G T A C C T A G C G T A G T C A G A T C C G T A A C T G G A T C
Reverse Opposite:
C A T G T G A C C G A T C T A G C A G T G C A T G A T C A C T G A C G T A T C G G T C A A C G T T G C A
p-value:1e-5
log p-value:-1.343e+01
Information Content per bp:1.576
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif15.38%
Number of Background Sequences with motif419.2
Percentage of Background Sequences with motif0.92%
Average Position of motif in Targets35.3 +/- 15.9bp
Average Position of motif in Background50.4 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0108.1_Atf1_2/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-KATCACGAAYAGC
GAATGACGAATAAC
 A C G T A C G T C G T A A C G T A T G C G T C A G T A C C T A G C G T A G T C A G A T C C G T A A C T G G A T C
T A C G C T G A T C G A A C G T C T A G C G T A A G T C C T A G G T C A C T G A A G C T C G T A C G T A G T A C

Atf1/MA0604.1/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:KATCACGAAYAGC
-ATGACGTA----
 A C G T C G T A A C G T A T G C G T C A G T A C C T A G C G T A G T C A G A T C C G T A A C T G G A T C
A C G T T C G A G C A T A C T G C G T A A G T C C T A G G A C T T C G A A C G T A C G T A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:KATCACGAAYAGC
AGTCACGC-----
 A C G T C G T A A C G T A T G C G T C A G T A C C T A G C G T A G T C A G A T C C G T A A C T G G A T C
G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T A C G T A C G T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:KATCACGAAYAGC
--GCACGTACCC-
 A C G T C G T A A C G T A T G C G T C A G T A C C T A G C G T A G T C A G A T C C G T A A C T G G A T C
A C G T A C G T C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C A C G T

Crem/MA0609.1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:KATCACGAAYAGC
TATGACGTAA---
 A C G T C G T A A C G T A T G C G T C A G T A C C T A G C G T A G T C A G A T C C G T A A C T G G A T C
A C G T C T G A A C G T A C T G C G T A A G T C A C T G A C G T G T C A C G T A A C G T A C G T A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:KATCACGAAYAGC
--GCACGTAY---
 A C G T C G T A A C G T A T G C G T C A G T A C C T A G C G T A G T C A G A T C C G T A A C T G G A T C
A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T A C G T A C G T A C G T

Mitf/MA0620.1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:KATCACGAAYAGC
GGTCACGTGG---
 A C G T C G T A A C G T A T G C G T C A G T A C C T A G C G T A G T C A G A T C C G T A A C T G G A T C
C T A G T C A G A C G T T G A C G T C A A G T C T C A G G C A T A C T G T C A G A C G T A C G T A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:KATCACGAAYAGC
-BGCACGTA----
 A C G T C G T A A C G T A T G C G T C A G T A C C T A G C G T A G T C A G A T C C G T A A C T G G A T C
A C G T A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A A C G T A C G T A C G T A C G T

Arntl/MA0603.1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:KATCACGAAYAGC
GGTCACGTGC---
 A C G T C G T A A C G T A T G C G T C A G T A C C T A G C G T A G T C A G A T C C G T A A C T G G A T C
C A T G T C A G C A G T G T A C G C T A A G T C C T A G G A C T C A T G G A T C A C G T A C G T A C G T

Atf3/MA0605.1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:KATCACGAAYAGC
GATGACGT-----
 A C G T C G T A A C G T A T G C G T C A G T A C C T A G C G T A G T C A G A T C C G T A A C T G G A T C
A T C G C T G A A C G T A C T G C G T A A G T C C T A G G A C T A C G T A C G T A C G T A C G T A C G T