Information for 9-GCAVCCCTGCTGGTAC (Motif 14)

A T C G A T G C C G T A T C G A G T A C A G T C G T A C C G A T C T A G A G T C C G A T A C T G A C T G C G A T C G T A G T A C
Reverse Opposite:
A C T G C G A T C G T A A G T C A G T C C G T A A C T G A G T C C G T A C A T G C T A G A C T G A C G T A C G T A T C G T A G C
p-value:1e-6
log p-value:-1.486e+01
Information Content per bp:1.732
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif5.13%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.0 +/- 16.9bp
Average Position of motif in Background36.3 +/- 9.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GCM1/MA0646.1/Jaspar

Match Rank:1
Score:0.64
Offset:5
Orientation:forward strand
Alignment:GCAVCCCTGCTGGTAC
-----CATGCGGGTAC
 A T C G A T G C C G T A T C G A G T A C A G T C G T A C C G A T C T A G A G T C C G A T A C T G A C T G C G A T C G T A G T A C
A C G T A C G T A C G T A C G T A C G T A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:2
Score:0.58
Offset:5
Orientation:forward strand
Alignment:GCAVCCCTGCTGGTAC
-----CCTGCTGAGH-
 A T C G A T G C C G T A T C G A G T A C A G T C G T A C C G A T C T A G A G T C C G A T A C T G A C T G C G A T C G T A G T A C
A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GCAVCCCTGCTGGTAC
GGCCYCCTGCTGDGH-
 A T C G A T G C C G T A T C G A G T A C A G T C G T A C C G A T C T A G A G T C C G A T A C T G A C T G C G A T C G T A G T A C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T

PB0024.1_Gcm1_1/Jaspar

Match Rank:4
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GCAVCCCTGCTGGTAC--
--NNNNATGCGGGTNNNN
 A T C G A T G C C G T A T C G A G T A C A G T C G T A C C G A T C T A G A G T C C G A T A C T G A C T G C G A T C G T A G T A C A C G T A C G T
A C G T A C G T G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:GCAVCCCTGCTGGTAC
------CAGCTGNT--
 A T C G A T G C C G T A T C G A G T A C A G T C G T A C C G A T C T A G A G T C C G A T A C T G A C T G C G A T C G T A G T A C
A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T

GCM2/MA0767.1/Jaspar

Match Rank:6
Score:0.57
Offset:5
Orientation:forward strand
Alignment:GCAVCCCTGCTGGTAC
-----TATGCGGGTA-
 A T C G A T G C C G T A T C G A G T A C A G T C G T A C C G A T C T A G A G T C C G A T A C T G A C T G C G A T C G T A G T A C
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GCAVCCCTGCTGGTAC
----CACAGCAGGGGG
 A T C G A T G C C G T A T C G A G T A C A G T C G T A C C G A T C T A G A G T C C G A T A C T G A C T G C G A T C G T A G T A C
A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:8
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GCAVCCCTGCTGGTAC
-----CCAGCTGTTN-
 A T C G A T G C C G T A T C G A G T A C A G T C G T A C C G A T C T A G A G T C C G A T A C T G A C T G C G A T C G T A G T A C
A C G T A C G T A C G T A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:9
Score:0.54
Offset:8
Orientation:forward strand
Alignment:GCAVCCCTGCTGGTAC--
--------VCAGGTRDRY
 A T C G A T G C C G T A T C G A G T A C A G T C G T A C C G A T C T A G A G T C C G A T A C T G A C T G C G A T C G T A G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C

PB0205.1_Zic1_2/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GCAVCCCTGCTGGTAC
-CCACACAGCAGGAGA
 A T C G A T G C C G T A T C G A G T A C A G T C G T A C C G A T C T A G A G T C C G A T A C T G A C T G C G A T C G T A G T A C
A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A