Information for 7-ATGCMAATKAAMAWCA (Motif 12)

C G T A A C G T A C T G A G T C G T C A C T G A C G T A A C G T A C T G C G T A C T G A G T A C C G T A C G T A G T A C C G T A
Reverse Opposite:
A C G T A C T G C G A T A C G T A C G T A G C T A C G T G T A C C G T A A C G T A G C T C A G T A C T G G T A C T C G A A C G T
p-value:1e-6
log p-value:-1.489e+01
Information Content per bp:1.873
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif10.26%
Number of Background Sequences with motif66.9
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets56.8 +/- 17.8bp
Average Position of motif in Background50.8 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-ATGCMAATKAAMAWCA
WATGCAAATGAG-----
 A C G T C G T A A C G T A C T G A G T C G T C A C T G A C G T A A C G T A C T G C G T A C T G A G T A C C G T A C G T A G T A C C G T A
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G A C G T A C G T A C G T A C G T A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:2
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----ATGCMAATKAAMAWCA
TTGTATGCAAATTAGA----
 A C G T A C G T A C G T A C G T C G T A A C G T A C T G A G T C G T C A C T G A C G T A A C G T A C T G C G T A C T G A G T A C C G T A C G T A G T A C C G T A
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A A C G T A C G T A C G T A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:3
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----ATGCMAATKAAMAWCA
TTGTATGCAAATTAGA----
 A C G T A C G T A C G T A C G T C G T A A C G T A C T G A G T C G T C A C T G A C G T A A C G T A C T G C G T A C T G A G T A C C G T A C G T A G T A C C G T A
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A A C G T A C G T A C G T A C G T

PH0145.1_Pou2f3/Jaspar

Match Rank:4
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----ATGCMAATKAAMAWCA
TTGTATGCAAATTAGA----
 A C G T A C G T A C G T A C G T C G T A A C G T A C T G A G T C G T C A C T G A C G T A A C G T A C T G C G T A C T G A G T A C C G T A C G T A G T A C C G T A
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A A C G T A C G T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:5
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--ATGCMAATKAAMAWCA
ATATGCAAATNNN-----
 A C G T A C G T C G T A A C G T A C T G A G T C G T C A C T G A C G T A A C G T A C T G C G T A C T G A G T A C C G T A C G T A G T A C C G T A
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A A C G T A C G T A C G T A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-ATGCMAATKAAMAWCA
TATGCWAATBAV-----
 A C G T C G T A A C G T A C T G A G T C G T C A C T G A C G T A A C G T A C T G C G T A C T G A G T A C C G T A C G T A G T A C C G T A
G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G A C G T A C G T A C G T A C G T A C G T

POU3F2/MA0787.1/Jaspar

Match Rank:7
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--ATGCMAATKAAMAWCA
TTATGCAAATTA------
 A C G T A C G T C G T A A C G T A C T G A G T C G T C A C T G A C G T A A C G T A C T G C G T A C T G A G T A C C G T A C G T A G T A C C G T A
C G A T G C A T T C G A G A C T C A T G A G T C G C T A C G T A G C T A C G A T A C G T G C T A A C G T A C G T A C G T A C G T A C G T A C G T

POU1F1/MA0784.1/Jaspar

Match Rank:8
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---ATGCMAATKAAMAWCA
AATATGCAAATTAG-----
 A C G T A C G T A C G T C G T A A C G T A C T G A G T C G T C A C T G A C G T A A C G T A C T G C G T A C T G A G T A C C G T A C G T A G T A C C G T A
C G T A C G T A C G A T C T G A G A C T C A T G A G T C G C T A C G T A G T C A C G A T A C G T C G T A C T A G A C G T A C G T A C G T A C G T A C G T

POU3F1/MA0786.1/Jaspar

Match Rank:9
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--ATGCMAATKAAMAWCA
TTATGCAAATTA------
 A C G T A C G T C G T A A C G T A C T G A G T C G T C A C T G A C G T A A C G T A C T G C G T A C T G A G T A C C G T A C G T A G T A C C G T A
C G A T G C A T C T G A G A C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A A C G T A C G T A C G T A C G T A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--ATGCMAATKAAMAWCA
TTATGCAAAT--------
 A C G T A C G T C G T A A C G T A C T G A G T C G T C A C T G A C G T A A C G T A C T G C G T A C T G A G T A C C G T A C G T A G T A C C G T A
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T