Information for 5-SRMGGKGASYKSG (Motif 11)

A T G C C T G A G T A C A C T G A C T G A C T G A C T G C G T A A T C G A G T C A C T G A T C G A C T G
Reverse Opposite:
A G T C A T G C G T A C C T A G A T G C A C G T A G T C G T A C A G T C A G T C A C T G A G C T A T C G
p-value:1e-6
log p-value:-1.496e+01
Information Content per bp:1.778
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif15.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets41.0 +/- 36.9bp
Average Position of motif in Background46.9 +/- 33.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MZF1/MA0056.1/Jaspar

Match Rank:1
Score:0.69
Offset:2
Orientation:forward strand
Alignment:SRMGGKGASYKSG
--TGGGGA-----
 A T G C C T G A G T A C A C T G A C T G A C T G A C T G C G T A A T C G A G T C A C T G A T C G A C T G
A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.56
Offset:1
Orientation:forward strand
Alignment:SRMGGKGASYKSG
-CAGGTAAGTAT-
 A T G C C T G A G T A C A C T G A C T G A C T G A C T G C G T A A T C G A G T C A C T G A T C G A C T G
A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-SRMGGKGASYKSG
TCAAGGTCAN----
 A C G T A T G C C T G A G T A C A C T G A C T G A C T G A C T G C G T A A T C G A G T C A C T G A T C G A C T G
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T A C G T A C G T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:4
Score:0.54
Offset:0
Orientation:forward strand
Alignment:SRMGGKGASYKSG---
GTAGGTCACTGGGTCA
 A T G C C T G A G T A C A C T G A C T G A C T G A C T G C G T A A T C G A G T C A C T G A T C G A C T G A C G T A C G T A C G T
A T C G A G C T C T G A C T A G A C T G A C G T G T A C G C T A A T G C A C G T C T A G C A T G T A C G C G A T A T G C C G T A

PB0097.1_Zfp281_1/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:SRMGGKGASYKSG--
GGGGGGGGGGGGGGA
 A T G C C T G A G T A C A C T G A C T G A C T G A C T G C G T A A T C G A G T C A C T G A T C G A C T G A C G T A C G T
A C T G C T A G C A T G C A T G A C T G C A T G C A T G C T A G C T A G C A T G A T C G C A T G C A T G T C A G G C T A

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:6
Score:0.53
Offset:0
Orientation:forward strand
Alignment:SRMGGKGASYKSG-------
NGAGGTCANNGAGTTCANNN
 A T G C C T G A G T A C A C T G A C T G A C T G A C T G C G T A A T C G A G T C A C T G A T C G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A T C A G C T G A C T A G C A T G A C G T A T G C C G T A A T G C G C A T T C A G C T G A A C T G A C G T C A G T A G T C C G T A C A G T C T A G C A T G

PB0107.1_Ascl2_2/Jaspar

Match Rank:7
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----SRMGGKGASYKSG
NATNGGGNGGGGANAN--
 A C G T A C G T A C G T A C G T A C G T A T G C C T G A G T A C A C T G A C T G A C T G A C T G C G T A A T C G A G T C A C T G A T C G A C T G
C T G A T G C A G A C T T C G A C T A G C T A G T C A G G A T C A C T G C A T G A T C G C A T G G C T A A C G T C T G A T A C G A C G T A C G T

ESR2/MA0258.2/Jaspar

Match Rank:8
Score:0.52
Offset:2
Orientation:forward strand
Alignment:SRMGGKGASYKSG----
--AGGTCACCCTGACCT
 A T G C C T G A G T A C A C T G A C T G A C T G A C T G C G T A A T C G A G T C A C T G A T C G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T

PB0140.1_Irf6_2/Jaspar

Match Rank:9
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--SRMGGKGASYKSG
NNNACCGAGAGTNNN
 A C G T A C G T A T G C C T G A G T A C A C T G A C T G A C T G A C T G C G T A A T C G A G T C A C T G A T C G A C T G
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

SP1/MA0079.3/Jaspar

Match Rank:10
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---SRMGGKGASYKSG
GGGGGCGGGGC-----
 A C G T A C G T A C G T A T G C C T G A G T A C A C T G A C T G A C T G A C T G C G T A A T C G A G T C A C T G A T C G A C T G
T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T A C G T A C G T A C G T A C G T