Information for 4-GAACACTCTCATT (Motif 9)

A C T G C G T A C G T A A G T C C G T A A G T C A C G T A G T C A C G T A G T C C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T A C T G C G T A A C T G C G T A A C T G A C G T A C T G A C G T A C G T A G T C
p-value:1e-3
log p-value:-6.962e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif2.70%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets26.0 +/- 0.0bp
Average Position of motif in Background23.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX21/MA0866.1/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GAACACTCTCATT---
-AACACTACCATTGTT
 A C T G C G T A C G T A A G T C C G T A A G T C A C G T A G T C A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T T C G A G T C A G A T C G C T A G T A C A G C T C T G A G T A C G T A C G T C A A G C T A G C T T A C G A G C T G A C T

Sox1/MA0870.1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GAACACTCTCATT---
-AACAATAACATTGTT
 A C T G C G T A C G T A A G T C C G T A A G T C A C G T A G T C A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T T G C A G C T A A G T C G T C A G T C A C G A T C G T A T C G A A T G C C G T A A C G T A G C T A C T G G A C T A G C T

SOX4/MA0867.1/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GAACACTCTCATT----
-AACACTGCAATTGTTC
 A C T G C G T A C G T A A G T C C G T A A G T C A C G T A G T C A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C T G A A G T C G T C A G T A C A G C T A C T G G T A C G T C A G T C A G A C T A G C T A C T G A G C T A C G T G A T C

Sox11/MA0869.1/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GAACACTCTCATT---
-AACAATTTCAGTGTT
 A C T G C G T A C G T A A G T C C G T A A G T C A C G T A G T C A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C G T A A G T C C G T A C G T A A C G T A G C T C A G T A G T C C G T A A C T G A C G T A C T G A C G T A G C T

PB0130.1_Gm397_2/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GAACACTCTCATT
AGCGGCACACACGCAA-
 A C G T A C G T A C G T A C G T A C T G C G T A C G T A A G T C C G T A A G T C A C G T A G T C A C G T A G T C C G T A A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GAACACTCTCATT---
-ACCACTCTCGGTCAC
 A C T G C G T A C G T A A G T C C G T A A G T C A C G T A G T C A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

PRDM1/MA0508.1/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GAACACTCTCATT----
--TCACTTTCACTTTCN
 A C T G C G T A C G T A A G T C C G T A A G T C A C G T A G T C A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GAACACTCTCATT------
--GCAACCTCATTATNNNN
 A C T G C G T A C G T A A G T C C G T A A G T C A C G T A G T C A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GAACACTCTCATT------
--NNNACCTCATTATCNTN
 A C T G C G T A C G T A A G T C C G T A A G T C A C G T A G T C A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:10
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GAACACTCTCATT---
----ACTTTCGTTTCT
 A C T G C G T A C G T A A G T C C G T A A G T C A C G T A G T C A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T