Information for 3-CTCTGGCAKARAA (Motif 6)

G A T C C G A T A T G C G C A T C A T G C A T G T G A C C G T A C A T G G T C A C T G A T G C A G T C A
Reverse Opposite:
C A G T A C G T A G C T C A G T G T A C A C G T A C T G G A T C G T A C C G T A T A C G C G T A C T A G
p-value:1e-5
log p-value:-1.311e+01
Information Content per bp:1.594
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif21.62%
Number of Background Sequences with motif922.3
Percentage of Background Sequences with motif2.36%
Average Position of motif in Targets49.5 +/- 24.2bp
Average Position of motif in Background50.0 +/- 30.5bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0145.1_Mafb_2/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CTCTGGCAKARAA--
CAATTGCAAAAATAT
 G A T C C G A T A T G C G C A T C A T G C A T G T G A C C G T A C A T G G T C A C T G A T G C A G T C A A C G T A C G T
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTCTGGCAKARAA
GGTCTGGCAT----
 A C G T G A T C C G A T A T G C G C A T C A T G C A T G T G A C C G T A C A T G G T C A C T G A T G C A G T C A
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTCTGGCAKARAA---
-ATTTGCATACAATGG
 G A T C C G A T A T G C G C A T C A T G C A T G T G A C C G T A C A T G G T C A C T G A T G C A G T C A A C G T A C G T A C G T
A C G T G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

PB0208.1_Zscan4_2/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CTCTGGCAKARAA----
-CGAAGCACACAAAATA
 G A T C C G A T A T G C G C A T C A T G C A T G T G A C C G T A C A T G G T C A C T G A T G C A G T C A A C G T A C G T A C G T A C G T
A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CTCTGGCAKARAA-
----NACAGGAAAT
 G A T C C G A T A T G C G C A T C A T G C A T G T G A C C G T A C A T G G T C A C T G A T G C A G T C A A C G T
A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CTCTGGCAKARAA--
---CGGAAGTGAAAC
 G A T C C G A T A T G C G C A T C A T G C A T G T G A C C G T A C A T G G T C A C T G A T G C A G T C A A C G T A C G T
A C G T A C G T A C G T T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C

E2F8/MA0865.1/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CTCTGGCAKARAA
-TTTGGCGGGAAA
 G A T C C G A T A T G C G C A T C A T G C A T G T G A C C G T A C A T G G T C A C T G A T G C A G T C A
A C G T C G A T A C G T A G C T A T C G C T A G A T G C A T C G C T A G C T A G G T C A C T G A C G T A

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CTCTGGCAKARAA
-CTTGGCAA----
 G A T C C G A T A T G C G C A T C A T G C A T G T G A C C G T A C A T G G T C A C T G A T G C A G T C A
A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T

E2F7/MA0758.1/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CTCTGGCAKARAA-
TTTTGGCGGGAAAA
 G A T C C G A T A T G C G C A T C A T G C A T G T G A C C G T A C A T G G T C A C T G A T G C A G T C A A C G T
C G A T C G A T G C A T C G A T T A C G A C T G A G T C A C T G A T C G A T C G C T G A C T G A G C T A G C T A

NFIA/MA0670.1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CTCTGGCAKARAA
NNTTGGCANN---
 G A T C C G A T A T G C G C A T C A T G C A T G T G A C C G T A C A T G G T C A C T G A T G C A G T C A
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T