Information for 2-YWTMAMAKWGYRTKKG (Motif 2)

A G C T G C T A C G A T G T C A G C T A G T C A C G T A A C T G C G T A C T A G G A C T C T G A C G A T A C T G C A T G A T C G
Reverse Opposite:
A T G C G T A C T G A C G C T A A G C T C T G A A G T C C G A T T G A C A C G T A C G T C A G T A C G T C G T A C G A T T C G A
p-value:1e-8
log p-value:-1.860e+01
Information Content per bp:1.731
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif8.11%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.3 +/- 30.0bp
Average Position of motif in Background20.0 +/- 15.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0082.1_Tcf3_1/Jaspar

Match Rank:1
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----YWTMAMAKWGYRTKKG
TATAGATCAAAGGAAAA---
 A C G T A C G T A C G T A C G T A G C T G C T A C G A T G T C A G C T A G T C A C G T A A C T G C G T A C T A G G A C T C T G A C G A T A C T G C A T G A T C G
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A A C G T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-YWTMAMAKWGYRTKKG
ACATCAAAGG-------
 A C G T A G C T G C T A C G A T G T C A G C T A G T C A C G T A A C T G C G T A C T A G G A C T C T G A C G A T A C T G C A T G A T C G
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Rhox11/MA0629.1/Jaspar

Match Rank:3
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---YWTMAMAKWGYRTKKG
TCNNTTTACAGCGNNNT--
 A C G T A C G T A C G T A G C T G C T A C G A T G T C A G C T A G T C A C G T A A C T G C G T A C T A G G A C T C T G A C G A T A C T G C A T G A T C G
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T A C G T A C G T

PH0157.1_Rhox11_1/Jaspar

Match Rank:4
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---YWTMAMAKWGYRTKKG
TCNNTTTACAGCGNNNT--
 A C G T A C G T A C G T A G C T G C T A C G A T G T C A G C T A G T C A C G T A A C T G C G T A C T A G G A C T C T G A C G A T A C T G C A T G A T C G
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:5
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---YWTMAMAKWGYRTKKG
CGGTTTCAAA---------
 A C G T A C G T A C G T A G C T G C T A C G A T G T C A G C T A G T C A C G T A A C T G C G T A C T A G G A C T C T G A C G A T A C T G C A T G A T C G
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:6
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---YWTMAMAKWGYRTKKG
AAAGATCAAAGGAA-----
 A C G T A C G T A C G T A G C T G C T A C G A T G T C A G C T A G T C A C G T A A C T G C G T A C T A G G A C T C T G A C G A T A C T G C A T G A T C G
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A A C G T A C G T A C G T A C G T A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.51
Offset:0
Orientation:forward strand
Alignment:YWTMAMAKWGYRTKKG
CCAAAAATAG------
 A G C T G C T A C G A T G T C A G C T A G T C A C G T A A C T G C G T A C T A G G A C T C T G A C G A T A C T G C A T G A T C G
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:8
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----YWTMAMAKWGYRTKKG
NNNAGATCAAAGGANNN---
 A C G T A C G T A C G T A C G T A G C T G C T A C G A T G T C A G C T A G T C A C G T A A C T G C G T A C T A G G A C T C T G A C G A T A C T G C A T G A T C G
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T A C G T A C G T A C G T

PH0158.1_Rhox11_2/Jaspar

Match Rank:9
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---YWTMAMAKWGYRTKKG
TCNCTTTACAGCGNNNT--
 A C G T A C G T A C G T A G C T G C T A C G A T G T C A G C T A G T C A C G T A A C T G C G T A C T A G G A C T C T G A C G A T A C T G C A T G A T C G
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:10
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-YWTMAMAKWGYRTKKG
ACATCAAAGGNA-----
 A C G T A G C T G C T A C G A T G T C A G C T A G T C A C G T A A C T G C G T A C T A G G A C T C T G A C G A T A C T G C A T G A T C G
C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A A C G T A C G T A C G T A C G T A C G T