Information for 1-CACACTARCAGTGRCN (Motif 1)

G A T C C G T A A G T C C G T A A G T C C G A T C G T A C T A G G A T C C G T A C T A G C G A T A C T G C T G A A G T C A C G T
Reverse Opposite:
C G T A C T A G A G C T A G T C C G T A A G T C A C G T C A T G A G T C C G A T C G T A T A C G C G A T T A C G C G A T C A T G
p-value:1e-8
log p-value:-1.946e+01
Information Content per bp:1.656
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif8.11%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.7 +/- 19.6bp
Average Position of motif in Background55.7 +/- 8.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0195.1_Zbtb3_2/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CACACTARCAGTGRCN-
-NNNNTGCCAGTGATTG
 G A T C C G T A A G T C C G T A A G T C C G A T C G T A C T A G G A T C C G T A C T A G C G A T A C T G C T G A A G T C A C G T A C G T
A C G T G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

Sox1/MA0870.1/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CACACTARCAGTGRCN
AACAATAACATTGTT-
 G A T C C G T A A G T C C G T A A G T C C G A T C G T A C T A G G A T C C G T A C T A G C G A T A C T G C T G A A G T C A C G T
T G C A G C T A A G T C G T C A G T C A C G A T C G T A T C G A A T G C C G T A A C G T A G C T A C T G G A C T A G C T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:3
Score:0.56
Offset:8
Orientation:reverse strand
Alignment:CACACTARCAGTGRCN
--------NCGTGACN
 G A T C C G T A A G T C C G T A A G T C C G A T C G T A C T A G G A T C C G T A C T A G C G A T A C T G C T G A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T

SOX4/MA0867.1/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CACACTARCAGTGRCN
GAACAATTGCAGTGTT-
 A C G T G A T C C G T A A G T C C G T A A G T C C G A T C G T A C T A G G A T C C G T A C T A G C G A T A C T G C T G A A G T C A C G T
C T A G C G T A C T G A A G T C C T G A C T G A A C G T A C G T C A T G A G T C C T G A A C T G A C G T C T A G A G C T C G A T A C G T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.55
Offset:6
Orientation:forward strand
Alignment:CACACTARCAGTGRCN-----
------AGAAATGACTTCCCT
 G A T C C G T A A G T C C G T A A G T C C G A T C G T A C T A G G A T C C G T A C T A G C G A T A C T G C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G T G C A C T G A T C G A A G C T C A T G T C G A A G T C G A C T A C G T A G T C G A T C G A T C G A C T

SOX21/MA0866.1/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CACACTARCAGTGRCN
AACACTACCATTGTT-
 G A T C C G T A A G T C C G T A A G T C C G A T C G T A C T A G G A T C C G T A C T A G C G A T A C T G C T G A A G T C A C G T
T C G A G T C A G A T C G C T A G T A C A G C T C T G A G T A C G T A C G T C A A G C T A G C T T A C G A G C T G A C T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CACACTARCAGTGRCN
----VRAACAATGG--
 G A T C C G T A A G T C C G T A A G T C C G A T C G T A C T A G G A T C C G T A C T A G C G A T A C T G C T G A A G T C A C G T
A C G T A C G T A C G T A C G T T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:CACACTARCAGTGRCN
------TTGAGTGSTT
 G A T C C G T A A G T C C G T A A G T C C G A T C G T A C T A G G A T C C G T A C T A G C G A T A C T G C T G A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

Sox11/MA0869.1/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CACACTARCAGTGRCN
AACAATTTCAGTGTT-
 G A T C C G T A A G T C C G T A A G T C C G A T C G T A C T A G G A T C C G T A C T A G C G A T A C T G C T G A A G T C A C G T
C G T A C G T A A G T C C G T A C G T A A C G T A G C T C A G T A G T C C G T A A C T G A C G T A C T G A C G T A G C T A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CACACTARCAGTGRCN--
--AAATTCAAGTGGNTTN
 G A T C C G T A A G T C C G T A A G T C C G A T C G T A C T A G G A T C C G T A C T A G C G A T A C T G C T G A A G T C A C G T A C G T A C G T
A C G T A C G T C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A