Information for 4-MRGGACTAATCTA (Motif 9)

G T A C C T G A A C T G A T C G C G T A A G T C A C G T C G T A G T C A A C G T G T A C G A C T C G T A
Reverse Opposite:
C G A T C G T A C A T G C G T A A C G T A C G T C G T A C T A G A C G T A T G C A G T C G A C T C A T G
p-value:1e-9
log p-value:-2.181e+01
Information Content per bp:1.756
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif2.19%
Number of Background Sequences with motif24.4
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets48.9 +/- 20.6bp
Average Position of motif in Background50.3 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0138.1_Pitx2/Jaspar

Match Rank:1
Score:0.79
Offset:-3
Orientation:forward strand
Alignment:---MRGGACTAATCTA-
TGAAGGGATTAATCATC
 A C G T A C G T A C G T G T A C C T G A A C T G A T C G C G T A A G T C A C G T C G T A G T C A A C G T G T A C G A C T C G T A A C G T
C A G T C A T G C G T A T C G A T C A G C T A G C A T G G T C A A G C T G A C T C G T A C T G A A G C T G A T C C T G A C G A T G A T C

PH0130.1_Otx2/Jaspar

Match Rank:2
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---MRGGACTAATCTA-
TGTAGGGATTAATTGTC
 A C G T A C G T A C G T G T A C C T G A A C T G A T C G C G T A A G T C A C G T C G T A G T C A A C G T G T A C G A C T C G T A A C G T
C A G T C T A G C G A T T C G A T C A G T C A G C A T G G T C A C G A T C G A T C G T A C T G A A G C T G A C T C T A G C A G T G A T C

PH0129.1_Otx1/Jaspar

Match Rank:3
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---MRGGACTAATCTA-
AGAGGGGATTAATTTAT
 A C G T A C G T A C G T G T A C C T G A A C T G A T C G C G T A A G T C A C G T C G T A G T C A A C G T G T A C G A C T C G T A A C G T
C T A G C A T G C G T A C T A G T A C G C T A G C A T G G T C A A C G T C G A T C G T A C G T A G A C T G C A T G A C T G C T A A G C T

Dmbx1/MA0883.1/Jaspar

Match Rank:4
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----MRGGACTAATCTA
TGAACCGGATTAATGAA
 A C G T A C G T A C G T A C G T G T A C C T G A A C T G A T C G C G T A A G T C A C G T C G T A G T C A A C G T G T A C G A C T C G T A
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:5
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----MRGGACTAATCTA
TGAACCGGATTAATGAA
 A C G T A C G T A C G T A C G T G T A C C T G A A C T G A T C G C G T A A G T C A C G T C G T A G T C A A C G T G T A C G A C T C G T A
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

Pitx1/MA0682.1/Jaspar

Match Rank:6
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:MRGGACTAATCTA
-GGGATTAA----
 G T A C C T G A A C T G A T C G C G T A A G T C A C G T C G T A G T C A A C G T G T A C G A C T C G T A
A C G T C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A A C G T A C G T A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:7
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:MRGGACTAATCTA
-GGGATTANN---
 G T A C C T G A A C T G A T C G C G T A A G T C A C G T C G T A G T C A A C G T G T A C G A C T C G T A
A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G A C G T A C G T A C G T

OTX2/MA0712.1/Jaspar

Match Rank:8
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:MRGGACTAATCTA
-NGGATTAA----
 G T A C C T G A A C T G A T C G C G T A A G T C A C G T C G T A G T C A A C G T G T A C G A C T C G T A
A C G T T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A A C G T A C G T A C G T A C G T

PH0125.1_Obox5_2/Jaspar

Match Rank:9
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---MRGGACTAATCTA-
NANAGGGATTAATTATN
 A C G T A C G T A C G T G T A C C T G A A C T G A T C G C G T A A G T C A C G T C G T A G T C A A C G T G T A C G A C T C G T A A C G T
T C G A C T G A T C A G T C G A T C A G T C A G A C T G G C T A A C G T C G A T C G T A C G T A G C A T G A C T T C G A G C A T T G A C

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:10
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:MRGGACTAATCTA
VRGGATTARN---
 G T A C C T G A A C T G A T C G C G T A A G T C A C G T C G T A G T C A A C G T G T A C G A C T C G T A
T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C A C G T A C G T A C G T