Information for 2-TGAGAATTTA (Motif 8)

C G A T C A T G C T G A A T C G C G T A C T G A C A G T A C G T C G A T G T C A
Reverse Opposite:
A C G T C G T A G T C A G T C A G A C T A C G T A T G C A G C T G T A C C G T A
p-value:1e-10
log p-value:-2.312e+01
Information Content per bp:1.829
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif5.64%
Number of Background Sequences with motif378.0
Percentage of Background Sequences with motif0.76%
Average Position of motif in Targets45.5 +/- 26.7bp
Average Position of motif in Background49.1 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0165.1_Sox11_2/Jaspar

Match Rank:1
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TGAGAATTTA
NNCNNAACAATTNT
 A C G T A C G T A C G T A C G T C G A T C A T G C T G A A T C G C G T A C T G A C A G T A C G T C G A T G T C A
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T

PB0175.1_Sox4_2/Jaspar

Match Rank:2
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TGAGAATTTA---
TNCNNAACAATTTTTNC
 A C G T A C G T A C G T A C G T C G A T C A T G C T G A A T C G C G T A C T G A C A G T A C G T C G A T G T C A A C G T A C G T A C G T
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TGAGAATTTA-
-GGGAATTTCC
 C G A T C A T G C T G A A T C G C G T A C T G A C A G T A C G T C G A T G T C A A C G T
A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

PB0139.1_Irf5_2/Jaspar

Match Rank:4
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----TGAGAATTTA
TTGACCGAGAATTCC
 A C G T A C G T A C G T A C G T A C G T C G A T C A T G C T G A A T C G C G T A C T G A C A G T A C G T C G A T G T C A
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TGAGAATTTA
CSTGGGAAAD--
 A C G T A C G T C G A T C A T G C T G A A T C G C G T A C T G A C A G T A C G T C G A T G T C A
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T

TEAD4/MA0809.1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGAGAATTTA
NTGGAATGTN
 C G A T C A T G C T G A A T C G C G T A C T G A C A G T A C G T C G A T G T C A
C T G A G C A T C T A G T C A G G C T A C G T A G C A T A C T G G A C T A C T G

PB0171.1_Sox18_2/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TGAGAATTTA----
GGACTGAATTCATGCC
 A C G T A C G T C G A T C A T G C T G A A T C G C G T A C T G A C A G T A C G T C G A T G T C A A C G T A C G T A C G T A C G T
C T A G A C T G C T G A A T G C A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A C G A T C T A G G T A C T G A C

PB0176.1_Sox5_2/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TGAGAATTTA---
TATCATAATTAAGGA
 A C G T A C G T C G A T C A T G C T G A A T C G C G T A C T G A C A G T A C G T C G A T G T C A A C G T A C G T A C G T
C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A

PB0138.1_Irf4_2/Jaspar

Match Rank:9
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----TGAGAATTTA
GNNACCGAGAATNNN
 A C G T A C G T A C G T A C G T A C G T C G A T C A T G C T G A A T C G C G T A C T G A C A G T A C G T C G A T G T C A
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:10
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TGAGAATTTA-----
---DGWTTTATGRCN
 C G A T C A T G C T G A A T C G C G T A C T G A C A G T A C G T C G A T G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C