Information for 1-ATGGAATCAC (Motif 2)

C G T A A C G T A C T G C A T G T C G A C G T A G A C T A G T C C G T A A G T C
Reverse Opposite:
A C T G C G A T A C T G C T G A A C G T A G C T G T A C A G T C G T C A A C G T
p-value:1e-10
log p-value:-2.493e+01
Information Content per bp:1.856
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif3.45%
Number of Background Sequences with motif84.6
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets41.5 +/- 20.6bp
Average Position of motif in Background52.7 +/- 23.4bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0014.1_Cphx/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---ATGGAATCAC-
ATGATCGAATCAAA
 A C G T A C G T A C G T C G T A A C G T A C T G C A T G T C G A C G T A G A C T A G T C C G T A A G T C A C G T
C T G A C G A T T C A G C G T A C A G T A T G C T A C G T G C A G T C A G A C T A G T C C G T A T C G A G C T A

DUXA/MA0884.1/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---ATGGAATCAC
CTAATTTAATCAA
 A C G T A C G T A C G T C G T A A C G T A C T G C A T G T C G A C G T A G A C T A G T C C G T A A G T C
G A T C G A C T C T G A T C G A G A C T A G C T A G C T T G C A C T G A A C G T A G T C C G T A C T G A

DUX4/MA0468.1/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--ATGGAATCAC
TAATTTAATCA-
 A C G T A C G T C G T A A C G T A C T G C A T G T C G A C G T A G A C T A G T C C G T A A G T C
G C A T C T G A C G T A G A C T A G C T A G C T G T C A C G T A A C G T A G T C C G T A A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--ATGGAATCAC
AGATGCAATCCC
 A C G T A C G T C G T A A C G T A C T G C A T G T C G A C G T A G A C T A G T C C G T A A G T C
T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C

GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:5
Score:0.63
Offset:-8
Orientation:forward strand
Alignment:--------ATGGAATCAC--
NNNNNBAGATAWYATCTVHN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G C A T G T C G A C G T A G A C T A G T C C G T A A G T C A C G T A C G T
C T G A C T G A C T A G T C G A C G T A A T G C C G T A A C T G C G T A A C G T C T G A C G A T A G C T C G T A A C G T A G T C C G A T T A C G G T C A G C A T

Six3/MA0631.1/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---ATGGAATCAC----
GATAGGGTATCACTAAT
 A C G T A C G T A C G T C G T A A C G T A C T G C A T G T C G A C G T A G A C T A G T C C G T A A G T C A C G T A C G T A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PH0163.1_Six3/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---ATGGAATCAC----
GATAGGGTATCACTAAT
 A C G T A C G T A C G T C G T A A C G T A C T G C A T G T C G A C G T A G A C T A G T C C G T A A G T C A C G T A C G T A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

JUN/MA0488.1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:ATGGAATCAC---
ATGACATCATCNN
 C G T A A C G T A C T G C A T G T C G A C G T A G A C T A G T C C G T A A G T C A C G T A C G T A C G T
T C G A A C G T A C T G C T G A A T G C T G C A C G A T G T A C C G T A A G C T G A T C G C A T G C A T

Gfi1/MA0038.1/Jaspar

Match Rank:9
Score:0.63
Offset:2
Orientation:forward strand
Alignment:ATGGAATCAC--
--CAAATCACTG
 C G T A A C G T A C T G C A T G T C G A C G T A G A C T A G T C C G T A A G T C A C G T A C G T
A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

PB0059.1_Six6_1/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---ATGGAATCAC----
AATAGGGTATCATATAT
 A C G T A C G T A C G T C G T A A C G T A C T G C A T G T C G A C G T A G A C T A G T C C G T A A G T C A C G T A C G T A C G T A C G T
C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T