Information for 3-TTTAACATGA (Motif 11)

A C G T A C G T C A G T C T G A C G T A A T G C G T C A A C G T A T C G C T G A
Reverse Opposite:
A G C T A T G C G T C A C A G T T A C G C G A T G A C T G T C A C G T A C G T A
p-value:1e-8
log p-value:-2.069e+01
Information Content per bp:1.832
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif4.70%
Number of Background Sequences with motif287.7
Percentage of Background Sequences with motif0.58%
Average Position of motif in Targets53.6 +/- 25.7bp
Average Position of motif in Background51.3 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0085.1_Irx4/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TTTAACATGA-----
NNTTTTACATGTANNNT
 A C G T A C G T A C G T A C G T C A G T C T G A C G T A A T G C G T C A A C G T A T C G C T G A A C G T A C G T A C G T A C G T A C G T
G C A T T A C G G C A T G C A T C A G T C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G A C T C G T A G C A T G C A T

PH0086.1_Irx5/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TTTAACATGA-----
ANTNNTACATGTANNTN
 A C G T A C G T A C G T A C G T C A G T C T G A C G T A A T G C G T C A A C G T A T C G C T G A A C G T A C G T A C G T A C G T A C G T
G C T A G T C A G C A T G C A T C A G T C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A C G A T G C T A G C A T G C A T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TTTAACATGA---
-GWAAYHTGABMC
 A C G T A C G T C A G T C T G A C G T A A T G C G T C A A C G T A T C G C T G A A C G T A C G T A C G T
A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

PH0083.1_Irx3_1/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TTTAACATGA-----
ANTATTACATGTANNNN
 A C G T A C G T A C G T A C G T C A G T C T G A C G T A A T G C G T C A A C G T A T C G C T G A A C G T A C G T A C G T A C G T A C G T
G C T A C T A G G C A T G C T A A C G T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A A G C T G C A T G A C T G C A T

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TTTAACATGA-
GGTTAAACATTAA
 A C G T A C G T A C G T A C G T C A G T C T G A C G T A A T G C G T C A A C G T A T C G C T G A A C G T
C T A G C T A G G C A T C G A T C T G A G T C A G C T A A T G C C G T A C A G T G A C T C G T A T G C A

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TTTAACATGA
BTVATTWGCATA-
 A C G T A C G T A C G T A C G T A C G T C A G T C T G A C G T A A T G C G T C A A C G T A T C G C T G A
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:7
Score:0.59
Offset:5
Orientation:forward strand
Alignment:TTTAACATGA-
-----CATGAC
 A C G T A C G T C A G T C T G A C G T A A T G C G T C A A C G T A T C G C T G A A C G T
A C G T A C G T A C G T A C G T A C G T T A G C T C G A A C G T C A T G C G T A A G T C

Arid3a/MA0151.1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TTTAACATGA
TTTAAT----
 A C G T A C G T C A G T C T G A C G T A A T G C G T C A A C G T A T C G C T G A
G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T A C G T

PH0087.1_Irx6/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TTTAACATGA-----
ANTTNTACATGTANTTN
 A C G T A C G T A C G T A C G T C A G T C T G A C G T A A T G C G T C A A C G T A T C G C T G A A C G T A C G T A C G T A C G T A C G T
G C T A C G A T C G A T G C A T A C G T C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G A C T C G A T C G A T C G A T

PH0084.1_Irx3_2/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TTTAACATGA-----
NNTATTACATGTANNNT
 A C G T A C G T A C G T A C G T C A G T C T G A C G T A A T G C G T C A A C G T A T C G C T G A A C G T A C G T A C G T A C G T A C G T
G C A T C T G A G C A T G C T A A C G T C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A C G A T G C T A G C A T G C A T