Information for 4-ATGTAAATACATCAAC (Motif 9)

C T G A A C G T A C T G A C G T C G T A C G T A C T G A A C G T C G T A A G T C C G T A A C G T G T A C C G T A C G T A A G T C
Reverse Opposite:
C T A G C G A T A C G T A C T G C G T A A C G T C T A G A C G T C G T A A G C T A C G T A C G T C G T A A G T C C G T A A G C T
p-value:1e-7
log p-value:-1.756e+01
Information Content per bp:1.931
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.16%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.8 +/- 25.5bp
Average Position of motif in Background43.0 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXB1/MA0845.1/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-ATGTAAATACATCAAC
TATGTAAATAT------
 A C G T C T G A A C G T A C T G A C G T C G T A C G T A C T G A A C G T C G T A A G T C C G T A A C G T G T A C C G T A C G T A A G T C
G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-ATGTAAATACATCAAC
TATGTAAATAT------
 A C G T C T G A A C G T A C T G A C G T C G T A C G T A C T G A A C G T C G T A A G T C C G T A A C G T G T A C C G T A C G T A A G T C
G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

PB0015.1_Foxa2_1/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---ATGTAAATACATCAAC
AAAAAGTAAACAAAGAC--
 A C G T A C G T A C G T C T G A A C G T A C T G A C G T C G T A C G T A C T G A A C G T C G T A A G T C C G T A A C G T G T A C C G T A C G T A A G T C
G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-ATGTAAATACATCAAC
AAAGTAAACA-------
 A C G T C T G A A C G T A C T G A C G T C G T A C G T A C T G A A C G T C G T A A G T C C G T A A C G T G T A C C G T A C G T A A G T C
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--ATGTAAATACATCAAC
AYATGYATATGCATR---
 A C G T A C G T C T G A A C G T A C T G A C G T C G T A C G T A C T G A A C G T C G T A A G T C C G T A A C G T G T A C C G T A C G T A A G T C
C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G C A T C T A G A C G T A C G T A C G T

Foxa2/MA0047.2/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---ATGTAAATACATCAAC
NCTAAGTAAACA-------
 A C G T A C G T A C G T C T G A A C G T A C T G A C G T C G T A C G T A C T G A A C G T C G T A A G T C C G T A A C G T G T A C C G T A C G T A A G T C
T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0103.1_Meox1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ATGTAAATACATCAAC
GAGGTAATTACCTCAG-
 A C G T C T G A A C G T A C T G A C G T C G T A C G T A C T G A A C G T C G T A A G T C C G T A A C G T G T A C C G T A C G T A A G T C
T C A G T G C A C A T G C A T G G A C T T G C A G C T A C A G T A C G T C T G A A T G C G T A C G A C T A G T C C G T A C T A G A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ATGTAAATACATCAAC
AAAGTAAACA-------
 A C G T C T G A A C G T A C T G A C G T C G T A C G T A C T G A A C G T C G T A A G T C C G T A A C G T G T A C C G T A C G T A A G T C
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOXC2/MA0846.1/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-ATGTAAATACATCAAC
TAAGTAAACAAA-----
 A C G T C T G A A C G T A C T G A C G T C G T A C G T A C T G A A C G T C G T A A G T C C G T A A C G T G T A C C G T A C G T A A G T C
G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A A C G T A C G T A C G T A C G T A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-ATGTAAATACATCAAC
TATGCAAAT--------
 A C G T C T G A A C G T A C T G A C G T C G T A C G T A C T G A A C G T C G T A A G T C C G T A A C G T G T A C C G T A C G T A A G T C
G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T