Information for 3-AATATGTAAA (Motif 8)

T C G A G T C A A G C T G T C A C G A T C A T G A G C T C G T A C G T A G T C A
Reverse Opposite:
C A G T A C G T A C G T T C G A G T A C C G T A A C G T T C G A A C G T A G C T
p-value:1e-7
log p-value:-1.797e+01
Information Content per bp:1.830
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif5.52%
Number of Background Sequences with motif545.7
Percentage of Background Sequences with motif1.10%
Average Position of motif in Targets57.7 +/- 23.3bp
Average Position of motif in Background49.1 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU2F1/MA0785.1/Jaspar

Match Rank:1
Score:0.79
Offset:0
Orientation:forward strand
Alignment:AATATGTAAA--
AATATGCAAATT
 T C G A G T C A A G C T G T C A C G A T C A T G A G C T C G T A C G T A G T C A A C G T A C G T
G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.76
Offset:1
Orientation:forward strand
Alignment:AATATGTAAA-
-ATATGCAAAT
 T C G A G T C A A G C T G T C A C G A T C A T G A G C T C G T A C G T A G T C A A C G T
A C G T G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T

POU5F1B/MA0792.1/Jaspar

Match Rank:3
Score:0.76
Offset:2
Orientation:forward strand
Alignment:AATATGTAAA-
--TATGCAAAT
 T C G A G T C A A G C T G T C A C G A T C A T G A G C T C G T A C G T A G T C A A C G T
A C G T A C G T G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:AATATGTAAA-
-TTATGCAAAT
 T C G A G T C A A G C T G T C A C G A T C A T G A G C T C G T A C G T A G T C A A C G T
A C G T C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T

POU3F1/MA0786.1/Jaspar

Match Rank:5
Score:0.73
Offset:1
Orientation:forward strand
Alignment:AATATGTAAA---
-TTATGCAAATTA
 T C G A G T C A A G C T G T C A C G A T C A T G A G C T C G T A C G T A G T C A A C G T A C G T A C G T
A C G T C G A T G C A T C T G A G A C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A

POU1F1/MA0784.1/Jaspar

Match Rank:6
Score:0.73
Offset:0
Orientation:forward strand
Alignment:AATATGTAAA----
AATATGCAAATTAG
 T C G A G T C A A G C T G T C A C G A T C A T G A G C T C G T A C G T A G T C A A C G T A C G T A C G T A C G T
C G T A C G T A C G A T C T G A G A C T C A T G A G T C G C T A C G T A G T C A C G A T A C G T C G T A C T A G

POU2F2/MA0507.1/Jaspar

Match Rank:7
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:AATATGTAAA----
-ATATGCAAATNNN
 T C G A G T C A A G C T G T C A C G A T C A T G A G C T C G T A C G T A G T C A A C G T A C G T A C G T A C G T
A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

FOXB1/MA0845.1/Jaspar

Match Rank:8
Score:0.73
Offset:2
Orientation:forward strand
Alignment:AATATGTAAA---
--TATGTAAATAT
 T C G A G T C A A G C T G T C A C G A T C A T G A G C T C G T A C G T A G T C A A C G T A C G T A C G T
A C G T A C G T G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T

POU3F4/MA0789.1/Jaspar

Match Rank:9
Score:0.71
Offset:2
Orientation:forward strand
Alignment:AATATGTAAA-
--TATGCAAAT
 T C G A G T C A A G C T G T C A C G A T C A T G A G C T C G T A C G T A G T C A A C G T
A C G T A C G T G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T

POU3F3/MA0788.1/Jaspar

Match Rank:10
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AATATGTAAA---
ATTATGCTAATTT
 T C G A G T C A A G C T G T C A C G A T C A T G A G C T C G T A C G T A G T C A A C G T A C G T A C G T
C G T A C G A T C G A T C G T A A C G T C A T G A G T C G C A T C G T A C T G A G C A T C G A T C G A T