Information for 3-TAACTTTTAARGGAAG (Motif 6)

A C G T C G T A C G T A G A T C A C G T G C A T A C G T A C G T C G T A C G T A C T G A A T C G C T A G G C T A C G T A A T C G
Reverse Opposite:
A T G C G A C T C A G T A G T C A T G C A G C T A C G T C G A T G T C A C G T A C G T A C G T A C A T G A C G T A C G T C G T A
p-value:1e-9
log p-value:-2.165e+01
Information Content per bp:1.756
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.45%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets27.2 +/- 10.3bp
Average Position of motif in Background43.9 +/- 14.1bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:1
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TAACTTTTAARGGAAG
GGTTAAACATTAA------
 A C G T A C G T A C G T A C G T C G T A C G T A G A T C A C G T G C A T A C G T A C G T C G T A C G T A C T G A A T C G C T A G G C T A C G T A A T C G
C T A G C T A G G C A T C G A T C T G A G T C A G C T A A T G C C G T A C A G T G A C T C G T A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TAACTTTTAARGGAAG
GTTAATNATTAA------
 A C G T A C G T A C G T C G T A C G T A G A T C A C G T G C A T A C G T A C G T C G T A C G T A C T G A A T C G C T A G G C T A C G T A A T C G
C T A G A C G T G C A T T C G A G T C A G C A T A T C G C G T A C A G T A G C T C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

HNF1A/MA0046.2/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TAACTTTTAARGGAAG
NGTTAATNATTAACN----
 A C G T A C G T A C G T A C G T C G T A C G T A G A T C A C G T G C A T A C G T A C G T C G T A C G T A C T G A A T C G C T A G G C T A C G T A A T C G
C G T A C A T G A G C T G C A T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G A T C G A C T A C G T A C G T A C G T A C G T

HNF1B/MA0153.2/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TAACTTTTAARGGAAG
GTTAATNATTAAC-----
 A C G T A C G T A C G T C G T A C G T A G A T C A C G T G C A T A C G T A C G T C G T A C G T A C T G A A T C G C T A G G C T A C G T A A T C G
C T A G A G C T G A C T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G T A C A C G T A C G T A C G T A C G T A C G T

Dlx1/MA0879.1/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TAACTTTTAARGGAAG
NNTAATTANN--------
 A C G T A C G T A C G T C G T A C G T A G A T C A C G T G C A T A C G T A C G T C G T A C G T A C T G A A T C G C T A G G C T A C G T A A T C G
T A C G T G C A C G A T T G C A G C T A C G A T A C G T C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0172.1_Sox1_2/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TAACTTTTAARGGAAG
CTATAATTGTTAGCG----
 A C G T A C G T A C G T A C G T C G T A C G T A G A T C A C G T G C A T A C G T A C G T C G T A C G T A C T G A A T C G C T A G G C T A C G T A A T C G
G T A C A G C T C T G A G A C T G C T A C T G A G A C T A G C T T A C G A C G T A C G T T G C A A C G T A G T C T A C G A C G T A C G T A C G T A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TAACTTTTAARGGAAG
-GNCTATAAAAGG---
 A C G T C G T A C G T A G A T C A C G T G C A T A C G T A C G T C G T A C G T A C T G A A T C G C T A G G C T A C G T A A T C G
A C G T A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G A C G T A C G T A C G T

PH0132.1_Pax6/Jaspar

Match Rank:8
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------TAACTTTTAARGGAAG
GNNAATTAATTAATCA------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A G A T C A C G T G C A T A C G T A C G T C G T A C G T A C T G A A T C G C T A G G C T A C G T A A T C G
C A T G G C A T A T G C T G C A T G C A G A C T G C A T T C G A G C T A C G A T A C G T C G T A C T G A A C G T G A T C T C G A A C G T A C G T A C G T A C G T A C G T A C G T

PH0051.1_Hoxa4/Jaspar

Match Rank:9
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----TAACTTTTAARGGAAG
CNAGTTAATTAATAANN----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A G A T C A C G T G C A T A C G T A C G T C G T A C G T A C T G A A T C G C T A G G C T A C G T A A T C G
T G A C T C G A G T C A T C A G G C A T G A C T G T C A C G T A G A C T A C G T C T G A C G T A A G C T C T G A C T G A G A C T G A T C A C G T A C G T A C G T A C G T

PH0070.1_Hoxc5/Jaspar

Match Rank:10
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----TAACTTTTAARGGAAG
CGAATTAATTAATTACT----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A G A T C A C G T G C A T A C G T A C G T C G T A C G T A C T G A A T C G C T A G G C T A C G T A A T C G
T A G C T A C G G T C A T C G A A G C T G A C T G T C A C G T A G C A T C A G T C T G A T C G A A G C T G C A T T G C A G A C T G C A T A C G T A C G T A C G T A C G T