Information for 4-CAGCAGCAGCAGC (Motif 12)

G T A C C T G A A T C G A G T C C T G A C T A G A G T C G T C A A C T G T A G C C G T A A T C G A T G C
Reverse Opposite:
A T C G A T G C G A C T A C T G G T A C A C G T C T A G A G T C A G C T C T A G A T G C A G C T C A T G
p-value:1e-5
log p-value:-1.293e+01
Information Content per bp:1.774
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.74%
Number of Background Sequences with motif53.4
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets27.2 +/- 11.8bp
Average Position of motif in Background53.7 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-CAGCAGCAGCAGC-
ADGGYAGYAGCATCT
 A C G T G T A C C T G A A T C G A G T C C T G A C T A G A G T C G T C A A C T G T A G C C G T A A T C G A T G C A C G T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

PB0003.1_Ascl2_1/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CAGCAGCAGCAGC----
NNNNAGCAGCTGCTGAN
 G T A C C T G A A T C G A G T C C T G A C T A G A G T C G T C A A C T G T A G C C G T A A T C G A T G C A C G T A C G T A C G T A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:3
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CAGCAGCAGCAGC-
--NNAGCAGCTGCT
 G T A C C T G A A T C G A G T C C T G A C T A G A G T C G T C A A C T G T A G C C G T A A T C G A T G C A C G T
A C G T A C G T T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

Ascl2/MA0816.1/Jaspar

Match Rank:4
Score:0.66
Offset:4
Orientation:forward strand
Alignment:CAGCAGCAGCAGC-
----AGCAGCTGCT
 G T A C C T G A A T C G A G T C C T G A C T A G A G T C G T C A A C T G T A G C C G T A A T C G A T G C A C G T
A C G T A C G T A C G T A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T

NHLH1/MA0048.2/Jaspar

Match Rank:5
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:CAGCAGCAGCAGC-
----CGCAGCTGCG
 G T A C C T G A A T C G A G T C C T G A C T A G A G T C G T C A A C T G T A G C C G T A A T C G A T G C A C G T
A C G T A C G T A C G T A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G

Myod1/MA0499.1/Jaspar

Match Rank:6
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CAGCAGCAGCAGC-
-NGNGACAGCTGCN
 G T A C C T G A A T C G A G T C C T G A C T A G A G T C G T C A A C T G T A G C C G T A A T C G A T G C A C G T
A C G T T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CAGCAGCAGCAGC
---CAGCAGCTGN
 G T A C C T G A A T C G A G T C C T G A C T A G A G T C G T C A A C T G T A G C C G T A A T C G A T G C
A C G T A C G T A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CAGCAGCAGCAGC
-ANCAGCTG----
 G T A C C T G A A T C G A G T C C T G A C T A G A G T C G T C A A C T G T A G C C G T A A T C G A T G C
A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CAGCAGCAGCAGC
-GACAGCTGCAG-
 G T A C C T G A A T C G A G T C C T G A C T A G A G T C G T C A A C T G T A G C C G T A A T C G A T G C
A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CAGCAGCAGCAGC
-AACAGCTGCAG-
 G T A C C T G A A T C G A G T C C T G A C T A G A G T C G T C A A C T G T A G C C G T A A T C G A T G C
A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G A C G T