Information for 4-TTGTACTTAC (Motif 11)

A C G T A C G T A C T G A C G T C T G A A G T C A C G T A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A C G T A A C T G A G C T C G T A A G T C C G T A C G T A
p-value:1e-6
log p-value:-1.480e+01
Information Content per bp:1.957
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.16%
Number of Background Sequences with motif8.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets68.8 +/- 25.3bp
Average Position of motif in Background57.1 +/- 18.1bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TTGTACTTAC---
--NNACTTACCTN
 A C G T A C G T A C T G A C G T C T G A A G T C A C G T A C G T C G T A A G T C A C G T A C G T A C G T
A C G T A C G T C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G

PH0061.1_Hoxb6/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TTGTACTTAC---
TATTGGTAATTACCTT
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T G A A G T C A C G T A C G T C G T A A G T C A C G T A C G T A C G T
G C A T G C T A C A G T C A G T A T C G A C T G A G C T G T C A C G T A C G A T C A G T C T G A G T A C T A G C C A G T A G C T

FOXP3/MA0850.1/Jaspar

Match Rank:3
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TTGTACTTAC
---TGTTTAC
 A C G T A C G T A C T G A C G T C T G A A G T C A C G T A C G T C G T A A G T C
A C G T A C G T A C G T A G C T T C A G A G C T G A C T C G A T C T G A A G T C

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TTGTACTTAC
CCATTGTTNY---
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T G A A G T C A C G T A C G T C G T A A G T C
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T A C G T A C G T

PB0062.1_Sox12_1/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TTGTACTTAC-
TAATTGTTCTAAAC
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T G A A G T C A C G T A C G T C G T A A G T C A C G T
G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C

FOXI1/MA0042.2/Jaspar

Match Rank:6
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TTGTACTTAC
---TGTTTAC
 A C G T A C G T A C T G A C G T C T G A A G T C A C G T A C G T C G T A A G T C
A C G T A C G T A C G T A G C T C T A G G C A T A C G T A C G T C G T A A G T C

PB0063.1_Sox13_1/Jaspar

Match Rank:7
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------TTGTACTTAC
AANTTATTGTTCTNNA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T G A A G T C A C G T A C G T C G T A A G T C
C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A

FOXP1/MA0481.1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TTGTACTTAC-----
CTTTGTTTACTTTTN
 A C G T A C G T A C T G A C G T C T G A A G T C A C G T A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TTGTACTTAC--
NYYTGTTTACHN
 A C G T A C G T A C T G A C G T C T G A A G T C A C G T A C G T C G T A A G T C A C G T A C G T
A G C T A G T C A G T C A C G T C T A G A C G T A C G T A C G T C G T A A G T C G A T C C G T A

PB0015.1_Foxa2_1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TTGTACTTAC-----
NNNTTTGTTTACTTTTN
 A C G T A C G T A C G T A C G T A C T G A C G T C T G A A G T C A C G T A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T
T A C G G A C T A T G C C G A T C G A T C G A T C T A G C G A T C A G T C A G T C T G A A G T C G C A T G C A T C G A T C G A T C G A T