Information for 1-TTACACTAAGGAT (Motif 1)

A G C T A C G T C G T A G T A C C G T A A T G C A C G T C G T A C T G A A C T G A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C A G T C A G C T A C G T G T C A A T C G A C G T A C T G A C G T C G T A C T G A
p-value:1e-12
log p-value:-2.968e+01
Information Content per bp:1.936
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.45%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.2 +/- 15.5bp
Average Position of motif in Background32.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TTACACTAAGGAT-
AAACAGACAAAGGAAT
 A C G T A C G T A G C T A C G T C G T A G T A C C G T A A T G C A C G T C G T A C T G A A C T G A C T G C G T A A C G T A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:TTACACTAAGGAT-----
-------AAGGATATNTN
 A G C T A C G T C G T A G T A C C G T A A T G C A C G T C G T A C T G A A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

Sox2/MA0143.3/Jaspar

Match Rank:3
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TTACACTAAGGAT
---AACAAAGG--
 A G C T A C G T C G T A G T A C C G T A A T G C A C G T C G T A C T G A A C T G A C T G C G T A A C G T
A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:4
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TTACACTAAGGAT-
CTCACACAATGGCGC
 A C G T A G C T A C G T C G T A G T A C C G T A A T G C A C G T C G T A C T G A A C T G A C T G C G T A A C G T A C G T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

Sox3/MA0514.1/Jaspar

Match Rank:5
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TTACACTAAGGAT
-AAAACAAAGG--
 A G C T A C G T C G T A G T A C C G T A A T G C A C G T C G T A C T G A A C T G A C T G C G T A A C G T
A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:6
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--TTACACTAAGGAT--
ATAAGAACAAAGGACTA
 A C G T A C G T A G C T A C G T C G T A G T A C C G T A A T G C A C G T C G T A C T G A A C T G A C T G C G T A A C G T A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0071.1_Sox4_1/Jaspar

Match Rank:7
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--TTACACTAAGGAT--
AGAAGAACAAAGGACTA
 A C G T A C G T A G C T A C G T C G T A G T A C C G T A A T G C A C G T C G T A C T G A A C T G A C T G C G T A A C G T A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

HLTF/MA0109.1/Jaspar

Match Rank:8
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:TTACACTAAGGAT
---NNATAAGGNN
 A G C T A C G T C G T A G T A C C G T A A T G C A C G T C G T A C T G A A C T G A C T G C G T A A C G T
A C G T A C G T A C G T C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T

PB0174.1_Sox30_2/Jaspar

Match Rank:9
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----TTACACTAAGGAT
TAAGATTATAATACGG--
 A C G T A C G T A C G T A C G T A C G T A G C T A C G T C G T A G T A C C G T A A T G C A C G T C G T A C T G A A C T G A C T G C G T A A C G T
G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G A C G T A C G T

PB0187.1_Tcf7_2/Jaspar

Match Rank:10
Score:0.49
Offset:-4
Orientation:reverse strand
Alignment:----TTACACTAAGGAT
NNNTTTNTAATACNG--
 A C G T A C G T A C G T A C G T A G C T A C G T C G T A G T A C C G T A A T G C A C G T C G T A C T G A A C T G A C T G C G T A A C G T
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G A C G T A C G T