p-value: | 1e-6 |
log p-value: | -1.455e+01 |
Information Content per bp: | 1.963 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 1.45% |
Number of Background Sequences with motif | 21.4 |
Percentage of Background Sequences with motif | 0.04% |
Average Position of motif in Targets | 33.4 +/- 25.6bp |
Average Position of motif in Background | 38.4 +/- 28.8bp |
Strand Bias (log2 ratio + to - strand density) | 0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 1 |
Score: | 0.72 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CACCAGCAGG--- -CACAGCAGGGGG |
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Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer
Match Rank: | 2 |
Score: | 0.68 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CACCAGCAGG----- DCHCAGCAGGRGGCC |
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Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer
Match Rank: | 3 |
Score: | 0.67 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CACCAGCAGG DCTCAGCAGG |
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PB0206.1_Zic2_2/Jaspar
Match Rank: | 4 |
Score: | 0.65 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CACCAGCAGG--- CCACACAGCAGGAGA |
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Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer
Match Rank: | 5 |
Score: | 0.64 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CACCAGCAGG NAACAGCTGG |
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Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer
Match Rank: | 6 |
Score: | 0.64 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CACCAGCAGG SNGCACCTGCHS- |
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PB0205.1_Zic1_2/Jaspar
Match Rank: | 7 |
Score: | 0.64 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CACCAGCAGG--- CCACACAGCAGGAGA |
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Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer
Match Rank: | 8 |
Score: | 0.62 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CACCAGCAGG CAGCAGCTGN |
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CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer
Match Rank: | 9 |
Score: | 0.61 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----CACCAGCAGG------ TGGCCACCAGGTGGCACTNT |
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GCM1/MA0646.1/Jaspar
Match Rank: | 10 |
Score: | 0.61 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CACCAGCAGG GTACCCGCATN |
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