Information for 1-MGGATSATCTCMGAGY (Motif 6)

G T A C A C T G A C T G C G T A A C G T A T C G C T G A A C G T A G T C A C G T A T G C G T A C A C T G C G T A A C T G A G T C
Reverse Opposite:
C T A G A G T C A C G T A G T C C A T G A T C G C G T A A C T G G T C A A G C T A T G C C G T A A C G T A G T C G T A C A C T G
p-value:1e-11
log p-value:-2.539e+01
Information Content per bp:1.878
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.6 +/- 25.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RHOXF1/MA0719.1/Jaspar

Match Rank:1
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:MGGATSATCTCMGAGY
NGGATTAN--------
 G T A C A C T G A C T G C G T A A C G T A T C G C T G A A C G T A G T C A C G T A T G C G T A C A C T G C G T A A C T G A G T C
C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:MGGATSATCTCMGAGY
-NGATGACGTCAT---
 G T A C A C T G A C T G C G T A A C G T A T C G C T G A A C G T A G T C A C G T A T G C G T A C A C T G C G T A A C T G A G T C
A C G T C T A G T C A G T C G A C G A T C A T G C T G A A G T C T C A G G A C T T G A C C G T A A G C T A C G T A C G T A C G T

PH0126.1_Obox6/Jaspar

Match Rank:3
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----MGGATSATCTCMGAGY
AAAAACGGATTATTG------
 A C G T A C G T A C G T A C G T A C G T G T A C A C T G A C T G C G T A A C G T A T C G C T G A A C G T A G T C A C G T A T G C G T A C A C T G C G T A A C T G A G T C
G T C A G C T A C T G A G C T A C T A G T A G C C T A G A C T G G T C A A C G T G A C T C G T A C G A T G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:4
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:MGGATSATCTCMGAGY
-GGATTAGC-------
 G T A C A C T G A C T G C G T A A C G T A T C G C T G A A C G T A G T C A C G T A T G C G T A C A C T G C G T A A C T G A G T C
A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0139.1_Pitx3/Jaspar

Match Rank:5
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---MGGATSATCTCMGAGY
AGGGGGATTAGCTGCC---
 A C G T A C G T A C G T G T A C A C T G A C T G C G T A A C G T A T C G C T G A A C G T A G T C A C G T A T G C G T A C A C T G C G T A A C T G A G T C
T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C A C G T A C G T A C G T

GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:6
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--MGGATSATCTCMGAGY--
NDBAGATRWTATCTVNNNNN
 A C G T A C G T G T A C A C T G A C T G C G T A A C G T A T C G C T G A A C G T A G T C A C G T A T G C G T A C A C T G C G T A A C T G A G T C A C G T A C G T
C G T A C A G T A T G C C G T A A C T G C G T A A C G T T C G A G C T A G A C T C G T A A C G T A G T C C G A T T A C G G C A T A G C T G A T C G A C T G A C T

JUND(var.2)/MA0492.1/Jaspar

Match Rank:7
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-MGGATSATCTCMGAGY
AAAGATGATGTCATC--
 A C G T G T A C A C T G A C T G C G T A A C G T A T C G C T G A A C G T A G T C A C G T A T G C G T A C A C T G C G T A A C T G A G T C
C G T A C T G A C G T A T C A G T C G A A C G T A C T G C G T A A G C T T C A G A G C T T G A C C G T A A G C T T G A C A C G T A C G T

OTX2/MA0712.1/Jaspar

Match Rank:8
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:MGGATSATCTCMGAGY
NGGATTAA--------
 G T A C A C T G A C T G C G T A A C G T A T C G C T G A A C G T A G T C A C G T A T G C G T A C A C T G C G T A A C T G A G T C
T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0123.1_Obox3/Jaspar

Match Rank:9
Score:0.49
Offset:-5
Orientation:forward strand
Alignment:-----MGGATSATCTCMGAGY
TGAGGGGGATTAACTAT----
 A C G T A C G T A C G T A C G T A C G T G T A C A C T G A C T G C G T A A C G T A T C G C T G A A C G T A G T C A C G T A T G C G T A C A C T G C G T A A C T G A G T C
G C A T A T C G T C G A T A C G C T A G C T A G C T A G C A T G G C T A A C G T G A C T C G T A C G T A G T A C C G A T G T C A G A C T A C G T A C G T A C G T A C G T

OTX1/MA0711.1/Jaspar

Match Rank:10
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:MGGATSATCTCMGAGY
CGGATTAN--------
 G T A C A C T G A C T G C G T A A C G T A T C G C T G A A C G T A G T C A C G T A T G C G T A C A C T G C G T A A C T G A G T C
T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T