Information for 2-ACTCGADGAC (Motif 11)

C G T A A T G C A G C T A G T C A C T G C G T A C G A T A C T G C G T A G T A C
Reverse Opposite:
A C T G A C G T A G T C G C T A A C G T G T A C A C T G C T G A A T C G A C G T
p-value:1e-9
log p-value:-2.292e+01
Information Content per bp:1.823
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif8.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets40.9 +/- 17.9bp
Average Position of motif in Background60.5 +/- 33.5bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RXRA::VDR/MA0074.1/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---ACTCGADGAC--
TGAACCCGATGACCC
 A C G T A C G T A C G T C G T A A T G C A G C T A G T C A C T G C G T A C G A T A C T G C G T A G T A C A C G T A C G T
A G C T C T A G C G T A C G T A A G T C A G C T A G T C A C T G C G A T A G C T C T A G C G T A G T A C A G T C A G T C

Vdr/MA0693.1/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---ACTCGADGAC---
TGAACTCNATGAACTC
 A C G T A C G T A C G T C G T A A T G C A G C T A G T C A C T G C G T A C G A T A C T G C G T A G T A C A C G T A C G T A C G T
G A C T T C A G T G C A T G C A G A T C A G C T A G T C C T G A C T G A G A C T T C A G T G C A T G C A G T A C A G C T A G T C

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:3
Score:0.60
Offset:4
Orientation:forward strand
Alignment:ACTCGADGAC
----CATGAC
 C G T A A T G C A G C T A G T C A C T G C G T A C G A T A C T G C G T A G T A C
A C G T A C G T A C G T A C G T T A G C T C G A A C G T C A T G C G T A A G T C

Bcl6/MA0463.1/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---ACTCGADGAC-
NGCTTTCTAGGAAN
 A C G T A C G T A C G T C G T A A T G C A G C T A G T C A C T G C G T A C G A T A C T G C G T A G T A C A C G T
C G A T C A T G G T A C G A C T A G C T G A C T A G T C A G C T C G T A C T A G C A T G T C G A G C T A G T C A

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:5
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------ACTCGADGAC----
NNNTGAACTCNNTGACCTCN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A T G C A G C T A G T C A C T G C G T A C G A T A C T G C G T A G T A C A C G T A C G T A C G T A C G T
G T A C G A T C G T C A G C A T T C A G G T C A G T C A G T A C A G C T A G T C C G T A T A C G G C A T T A C G T G C A G T A C G A T C G A C T A G T C G A C T

PB0006.1_Bcl6b_1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--ACTCGADGAC----
TCTTTCGAGGAATTTG
 A C G T A C G T C G T A A T G C A G C T A G T C A C T G C G T A C G A T A C T G C G T A G T A C A C G T A C G T A C G T A C G T
C G A T G A T C G A C T C G A T C G A T A G T C A C T G C G T A T C A G C A T G C G T A G C T A G A C T G C A T G A C T T A C G

Atf3/MA0605.1/Jaspar

Match Rank:7
Score:0.58
Offset:4
Orientation:forward strand
Alignment:ACTCGADGAC--
----GATGACGT
 C G T A A T G C A G C T A G T C A C T G C G T A C G A T A C T G C G T A G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A T C G C T G A A C G T A C T G C G T A A G T C C T A G G A C T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:8
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---ACTCGADGAC
NSCACTYVAV---
 A C G T A C G T A C G T C G T A A T G C A G C T A G T C A C T G C G T A C G A T A C T G C G T A G T A C
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:9
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---ACTCGADGAC
RSCACTYRAG---
 A C G T A C G T A C G T C G T A A T G C A G C T A G T C A C T G C G T A C G A T A C T G C G T A G T A C
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:10
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----ACTCGADGAC
MRSCACTYAA----
 A C G T A C G T A C G T A C G T C G T A A T G C A G C T A G T C A C T G C G T A C G A T A C T G C G T A G T A C
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T A C G T A C G T