Information for 10-AGSGGACAAT (Motif 33)

C T G A A T C G A T G C T A C G T A C G C G T A A G T C G C T A G T C A G C A T
Reverse Opposite:
C G T A C A G T C G A T C T A G C G A T A T G C A T G C A T C G A T G C A G C T
p-value:1e-5
log p-value:-1.286e+01
Information Content per bp:1.736
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.29%
Number of Background Sequences with motif299.8
Percentage of Background Sequences with motif0.61%
Average Position of motif in Targets50.9 +/- 23.4bp
Average Position of motif in Background48.2 +/- 25.2bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17/MA0078.1/Jaspar

Match Rank:1
Score:0.72
Offset:4
Orientation:reverse strand
Alignment:AGSGGACAAT---
----GACAATGNN
 C T G A A T C G A T G C T A C G T A C G C G T A A G T C G C T A G T C A G C A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

PB0118.1_Esrra_2/Jaspar

Match Rank:2
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----AGSGGACAAT---
GGCGAGGGGTCAAGGGC
 A C G T A C G T A C G T A C G T C T G A A T C G A T G C T A C G T A C G C G T A A G T C G C T A G T C A G C A T A C G T A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

PB0030.1_Hnf4a_1/Jaspar

Match Rank:3
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----AGSGGACAAT---
CTCCAGGGGTCAATTGA
 A C G T A C G T A C G T A C G T C T G A A T C G A T G C T A C G T A C G C G T A A G T C G C T A G T C A G C A T A C G T A C G T A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

PB0173.1_Sox21_2/Jaspar

Match Rank:4
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--AGSGGACAAT-----
NNNNNGAACAATTGANN
 A C G T A C G T C T G A A T C G A T G C T A C G T A C G C G T A A G T C G C T A G T C A G C A T A C G T A C G T A C G T A C G T A C G T
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AGSGGACAAT-----
TCACGGAACAATAGGTG
 A C G T A C G T C T G A A T C G A T G C T A C G T A C G C G T A A G T C G C T A G T C A G C A T A C G T A C G T A C G T A C G T A C G T
G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:6
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:AGSGGACAAT--
--RNAACAATGG
 C T G A A T C G A T G C T A C G T A C G C G T A A G T C G C T A G T C A G C A T A C G T A C G T
A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G

PB0168.1_Sox14_2/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AGSGGACAAT-----
CTCACACAATGGCGC
 C T G A A T C G A T G C T A C G T A C G C G T A A G T C G C T A G T C A G C A T A C G T A C G T A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:8
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:AGSGGACAAT--
--VRRACAAWGG
 C T G A A T C G A T G C T A C G T A C G C G T A A G T C G C T A G T C A G C A T A C G T A C G T
A C G T A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:9
Score:0.63
Offset:3
Orientation:forward strand
Alignment:AGSGGACAAT---
---RAACAATGGN
 C T G A A T C G A T G C T A C G T A C G C G T A A G T C G C T A G T C A G C A T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C

Sox6/MA0515.1/Jaspar

Match Rank:10
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:AGSGGACAAT--
--AAAACAATGG
 C T G A A T C G A T G C T A C G T A C G C G T A A G T C G C T A G T C A G C A T A C G T A C G T
A C G T A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G