Information for 9-CAARGTCTHC (Motif 31)

A G T C C T G A C T G A C T G A A T C G C G A T A G T C A C G T G C T A A G T C
Reverse Opposite:
T C A G C G A T C G T A C T A G C G T A A T G C G A C T G A C T A G C T A C T G
p-value:1e-5
log p-value:-1.365e+01
Information Content per bp:1.722
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.93%
Number of Background Sequences with motif440.0
Percentage of Background Sequences with motif0.89%
Average Position of motif in Targets46.2 +/- 24.6bp
Average Position of motif in Background50.6 +/- 25.2bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0014.1_Esrra_1/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----CAARGTCTHC---
TATTCAAGGTCATGCGA
 A C G T A C G T A C G T A C G T A G T C C T G A C T G A C T G A A T C G C G A T A G T C A C G T G C T A A G T C A C G T A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:2
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CAARGTCTHC
NTCAAGGTCA--
 A C G T A C G T A G T C C T G A C T G A C T G A A T C G C G A T A G T C A C G T G C T A A G T C
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:3
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CAARGTCTHC
BTCAAGGTCA--
 A C G T A C G T A G T C C T G A C T G A C T G A A T C G C G A T A G T C A C G T G C T A A G T C
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CAARGTCTHC
TCAAGGTCATA
 A C G T A G T C C T G A C T G A C T G A A T C G C G A T A G T C A C G T G C T A A G T C
G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A

Esrrg/MA0643.1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CAARGTCTHC
TCAAGGTCAT-
 A C G T A G T C C T G A C T G A C T G A A T C G C G A T A G T C A C G T G C T A A G T C
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T

Esrra/MA0592.2/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CAARGTCTHC
TTCAAGGTCAT-
 A C G T A C G T A G T C C T G A C T G A C T G A A T C G C G A T A G T C A C G T G C T A A G T C
A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:7
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CAARGTCTHC
AAGTTCAAGGTCAGC
 A C G T A C G T A C G T A C G T A C G T A G T C C T G A C T G A C T G A A T C G C G A T A G T C A C G T G C T A A G T C
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CAARGTCTHC
CAAGGHCANV
 A G T C C T G A C T G A C T G A A T C G C G A T A G T C A C G T G C T A A G T C
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CAARGTCTHC
TCAAGGTCAN-
 A C G T A G T C C T G A C T G A C T G A A T C G C G A T A G T C A C G T G C T A A G T C
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:10
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------CAARGTCTHC
AGAGTCCAAAGTCCA-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C T G A C T G A C T G A A T C G C G A T A G T C A C G T G C T A A G T C
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T