Information for 11-CGTGGGYGTCCCGGGG (Motif 20)

A G T C T A C G A C G T A C T G C T A G A T C G A G C T A C T G A C G T A G T C A G T C A G T C A C T G A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C A G T C A C T G A C T G A C T G C G T A A G T C T C A G A T G C A G T C A G T C G T C A A G T C C T A G
p-value:1e-7
log p-value:-1.792e+01
Information Content per bp:1.860
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif17.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets65.1 +/- 18.6bp
Average Position of motif in Background51.9 +/- 24.9bp
Strand Bias (log2 ratio + to - strand density)3.3
Multiplicity (# of sites on avg that occur together)1.57
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:1
Score:0.59
Offset:6
Orientation:forward strand
Alignment:CGTGGGYGTCCCGGGG--
------NGTCCCNNGGGA
 A G T C T A C G A C G T A C T G C T A G A T C G A G C T A C T G A C G T A G T C A G T C A G T C A C T G A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A

PB0052.1_Plagl1_1/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CGTGGGYGTCCCGGGG
TTGGGGGCGCCCCTAG-
 A C G T A G T C T A C G A C G T A C T G C T A G A T C G A G C T A C T G A C G T A G T C A G T C A G T C A C T G A C T G A C T G A C T G
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.56
Offset:6
Orientation:forward strand
Alignment:CGTGGGYGTCCCGGGG--
------GTCCCCAGGGGA
 A G T C T A C G A C G T A C T G C T A G A T C G A G C T A C T G A C G T A G T C A G T C A G T C A C T G A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A

PB0153.1_Nr2f2_2/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CGTGGGYGTCCCGGGG--
--NNNNTGACCCGGCGCG
 A G T C T A C G A C G T A C T G C T A G A T C G A G C T A C T G A C G T A G T C A G T C A G T C A C T G A C T G A C T G A C T G A C G T A C G T
A C G T A C G T C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:5
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:CGTGGGYGTCCCGGGG--
------TGCCCNGGGGCA
 A G T C T A C G A C G T A C T G C T A G A T C G A G C T A C T G A C G T A G T C A G T C A G T C A C T G A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:CGTGGGYGTCCCGGGG
-----CTGTTCCTGG-
 A G T C T A C G A C G T A C T G C T A G A T C G A G C T A C T G A C G T A G T C A G T C A G T C A C T G A C T G A C T G A C T G
A C G T A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:7
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CGTGGGYGTCCCGGGG---
----NCCCCCCCGGGGGGN
 A G T C T A C G A C G T A C T G C T A G A T C G A G C T A C T G A C G T A G T C A G T C A G T C A C T G A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

PB0204.1_Zfp740_2/Jaspar

Match Rank:8
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:CGTGGGYGTCCCGGGG-------
------ANTNCCGGGGGGAANTT
 A G T C T A C G A C G T A C T G C T A G A T C G A G C T A C T G A C G T A G T C A G T C A G T C A C T G A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A G T C G A C T G A C T T A G C A T G C T A C G T A C G A C T G C T A G C T A G C T A G C G T A G T C A G A C T G A C T G A C T

TFAP2B/MA0811.1/Jaspar

Match Rank:9
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:CGTGGGYGTCCCGGGG--
------TGCCCTNGGGCA
 A G T C T A C G A C G T A C T G C T A G A T C G A G C T A C T G A C G T A G T C A G T C A G T C A C T G A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A

PB0102.1_Zic2_1/Jaspar

Match Rank:10
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CGTGGGYGTCCCGGGG---
----ACCCCCCCGGGGGGN
 A G T C T A C G A C G T A C T G C T A G A T C G A G C T A C T G A C G T A G T C A G T C A G T C A C T G A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G