Information for 9-CAGGCMCCCTGCAGCT (Motif 13)

A G T C C T G A A C T G A C T G A T G C T G C A A T G C A G T C A G T C A C G T C T A G G T A C T G C A A C T G A G T C A C G T
Reverse Opposite:
T G C A A C T G T A G C A C G T A C T G A G T C G T C A A C T G A C T G A T C G A C G T A T C G A G T C G T A C A G C T A C T G
p-value:1e-9
log p-value:-2.075e+01
Information Content per bp:1.795
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif6.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.4 +/- 27.4bp
Average Position of motif in Background53.2 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:1
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CAGGCMCCCTGCAGCT-
--GGCCYCCTGCTGDGH
 A G T C C T G A A C T G A C T G A T G C T G C A A T G C A G T C A G T C A C G T C T A G G T A C T G C A A C T G A G T C A C G T A C G T
A C G T A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

ZIC4/MA0751.1/Jaspar

Match Rank:2
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CAGGCMCCCTGCAGCT-
--GACCCCCCGCTGTGC
 A G T C C T G A A C T G A C T G A T G C T G C A A T G C A G T C A G T C A C G T C T A G G T A C T G C A A C T G A G T C A C G T A C G T
A C G T A C G T A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

ZIC3/MA0697.1/Jaspar

Match Rank:3
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CAGGCMCCCTGCAGCT-
--GACCCCCCGCTGCGC
 A G T C C T G A A C T G A C T G A T G C T G C A A T G C A G T C A G T C A C G T C T A G G T A C T G C A A C T G A G T C A C G T A C G T
A C G T A C G T A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

ZIC1/MA0696.1/Jaspar

Match Rank:4
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CAGGCMCCCTGCAGCT
--GACCCCCCGCTGTG
 A G T C C T G A A C T G A C T G A T G C T G C A A T G C A G T C A G T C A C G T C T A G G T A C T G C A A C T G A G T C A C G T
A C G T A C G T A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CAGGCMCCCTGCAGCT
GTCACGCTCNCTGA----
 A C G T A C G T A G T C C T G A A C T G A C T G A T G C T G C A A T G C A G T C A G T C A C G T C T A G G T A C T G C A A C T G A G T C A C G T
A C T G G A C T A G T C C T G A G A T C T C A G A T G C G A C T A G T C A T G C T A G C A G C T A T C G T G C A A C G T A C G T A C G T A C G T

KLF16/MA0741.1/Jaspar

Match Rank:6
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CAGGCMCCCTGCAGCT
GCCACGCCCCC-------
 A C G T A C G T A G T C C T G A A C T G A C T G A T G C T G C A A T G C A G T C A G T C A C G T C T A G G T A C T G C A A C T G A G T C A C G T
T C A G G T A C G T A C T G C A G T A C C T A G G T A C T A G C G A T C G T A C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:7
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CAGGCMCCCTGCAGCT
GGTCCCGCCCCCTTCTC--
 A C G T A C G T A C G T A G T C C T G A A C T G A C T G A T G C T G C A A T G C A G T C A G T C A C G T C T A G G T A C T G C A A C T G A G T C A C G T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:8
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CAGGCMCCCTGCAGCT--
-AATCGCACTGCATTCCG
 A G T C C T G A A C T G A C T G A T G C T G C A A T G C A G T C A G T C A C G T C T A G G T A C T G C A A C T G A G T C A C G T A C G T A C G T
A C G T C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

KLF14/MA0740.1/Jaspar

Match Rank:9
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---CAGGCMCCCTGCAGCT
GGCCACGCCCCCTT-----
 A C G T A C G T A C G T A G T C C T G A A C T G A C T G A T G C T G C A A T G C A G T C A G T C A C G T C T A G G T A C T G C A A C T G A G T C A C G T
C A T G T C A G G T A C A G T C T G C A G A T C T C A G A T G C A G T C A G T C G T A C G A T C G A C T G A C T A C G T A C G T A C G T A C G T A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:10
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CAGGCMCCCTGCAGCT
-AAGACCCYYN-----
 A G T C C T G A A C T G A C T G A T G C T G C A A T G C A G T C A G T C A C G T C T A G G T A C T G C A A C T G A G T C A C G T
A C G T T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C A C G T A C G T A C G T A C G T A C G T