Information for 14-CGGGCHTCACAGT (Motif 20)

A G T C A C T G C T A G A T C G A T G C G A C T A C G T A G T C C T G A A G T C T C G A A C T G C G A T
Reverse Opposite:
G C T A A G T C A C G T T A C G A G C T A C T G T G C A C T G A A T C G A T G C A G T C G T A C A C T G
p-value:1e-8
log p-value:-1.844e+01
Information Content per bp:1.717
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.2 +/- 13.3bp
Average Position of motif in Background63.4 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CGGGCHTCACAGT
TGGGGCCCAC---
 A G T C A C T G C T A G A T C G A T G C G A C T A C G T A G T C C T G A A G T C T C G A A C T G C G A T
G A C T C T A G A C T G A C T G T A C G A G T C A G T C A G T C C T G A A T G C A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:CGGGCHTCACAGT
-------CACAGN
 A G T C A C T G C T A G A T C G A T G C G A C T A C G T A G T C C T G A A G T C T C G A A C T G C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

PB0059.1_Six6_1/Jaspar

Match Rank:3
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CGGGCHTCACAGT-
AATAGGGTATCATATAT
 A C G T A C G T A C G T A G T C A C T G C T A G A T C G A T G C G A C T A C G T A G T C C T G A A G T C T C G A A C T G C G A T A C G T
C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T

Hnf4a/MA0114.3/Jaspar

Match Rank:4
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CGGGCHTCACAGT-----
--GGGGTCAAAGTCCAAT
 A G T C A C T G C T A G A T C G A T G C G A C T A C G T A G T C C T G A A G T C T C G A A C T G C G A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T

HNF4G/MA0484.1/Jaspar

Match Rank:5
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CGGGCHTCACAGT---
-AGAGTCCAAAGTCCA
 A G T C A C T G C T A G A T C G A T G C G A C T A C G T A G T C C T G A A G T C T C G A A C T G C G A T A C G T A C G T A C G T
A C G T C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:6
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CGGGCHTCACAGT---
CANAGNNCAAAGTCCA
 A G T C A C T G C T A G A T C G A T G C G A C T A C G T A G T C C T G A A G T C T C G A A C T G C G A T A C G T A C G T A C G T
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A

PH0162.1_Six2/Jaspar

Match Rank:7
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CGGGCHTCACAGT-
AATGGGGTATCACGTTT
 A C G T A C G T A C G T A G T C A C T G C T A G A T C G A T G C G A C T A C G T A G T C C T G A A G T C T C G A A C T G C G A T A C G T
C T G A G C T A C A G T T C A G C T A G A C T G C T A G A C G T C T G A A C G T G A T C C T G A G A T C C A G T G C A T G A C T C A G T

Six3/MA0631.1/Jaspar

Match Rank:8
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CGGGCHTCACAGT-
GATAGGGTATCACTAAT
 A C G T A C G T A C G T A G T C A C T G C T A G A T C G A T G C G A C T A C G T A G T C C T G A A G T C T C G A A C T G C G A T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PH0163.1_Six3/Jaspar

Match Rank:9
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CGGGCHTCACAGT-
GATAGGGTATCACTAAT
 A C G T A C G T A C G T A G T C A C T G C T A G A T C G A T G C G A C T A C G T A G T C C T G A A G T C T C G A A C T G C G A T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PH0165.1_Six6_1/Jaspar

Match Rank:10
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---CGGGCHTCACAGT-
AATAGGGTATCAATTAT
 A C G T A C G T A C G T A G T C A C T G C T A G A T C G A T G C G A C T A C G T A G T C C T G A A G T C T C G A A C T G C G A T A C G T
C T G A G C T A C G A T T C G A T C A G A C T G T C A G A C G T C T G A A C G T G A T C C G T A G T C A C G A T G C A T G C T A A C G T