Information for 7-GCACAGGGCAGCT (Motif 11)

A C T G A T G C C G T A A G T C C G T A A C T G A C T G A T C G A G T C C G T A A C T G A G T C A C G T
Reverse Opposite:
T C G A A C T G A G T C A C G T A C T G A T G C A G T C A G T C A C G T A C T G C G A T A T C G A G T C
p-value:1e-9
log p-value:-2.163e+01
Information Content per bp:1.905
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif5.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.2 +/- 31.5bp
Average Position of motif in Background54.2 +/- 35.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GCACAGGGCAGCT
-CAAAGGTCAG--
 A C T G A T G C C G T A A G T C C G T A A C T G A C T G A T C G A G T C C G T A A C T G A G T C A C G T
A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GCACAGGGCAGCT
TAGGGCAAAGGTCA---
 A C G T A C G T A C G T A C G T A C T G A T G C C G T A A G T C C G T A A C T G A C T G A T C G A G T C C G T A A C T G A G T C A C G T
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GCACAGGGCAGCT
--TNNGGGCAG--
 A C T G A T G C C G T A A G T C C G T A A C T G A C T G A T C G A G T C C G T A A C T G A G T C A C G T
A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GCACAGGGCAGCT
-CACAGN------
 A C T G A T G C C G T A A G T C C G T A A C T G A C T G A T C G A G T C C G T A A C T G A G T C A C G T
A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

MTF1/MA0863.1/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GCACAGGGCAGCT
TTTGCACACGGCAC--
 A C G T A C G T A C G T A C T G A T G C C G T A A G T C C G T A A C T G A C T G A T C G A G T C C G T A A C T G A G T C A C G T
C A G T A C G T G A C T T C A G G T A C C G T A T A G C G T C A A G T C C A T G C A T G A G T C T G C A G A T C A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:6
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----GCACAGGGCAGCT
GTAGGGCAAAGGTCA---
 A C G T A C G T A C G T A C G T A C G T A C T G A T G C C G T A A G T C C G T A A C T G A C T G A T C G A G T C C G T A A C T G A G T C A C G T
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GCACAGGGCAGCT
TGGGGCAAAGGTCA---
 A C G T A C G T A C G T A C G T A C T G A T G C C G T A A G T C C G T A A C T G A C T G A T C G A G T C C G T A A C T G A G T C A C G T
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GCACAGGGCAGCT
--TRAGGTCA---
 A C T G A T G C C G T A A G T C C G T A A C T G A C T G A T C G A G T C C G T A A C T G A G T C A C G T
A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GCACAGGGCAGCT
WDNCTGGGCA---
 A C T G A T G C C G T A A G T C C G T A A C T G A C T G A T C G A G T C C G T A A C T G A G T C A C G T
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:10
Score:0.56
Offset:6
Orientation:forward strand
Alignment:GCACAGGGCAGCT----
------GACAGCTGCAG
 A C T G A T G C C G T A A G T C C G T A A C T G A C T G A T C G A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G