Information for 7-CACAGGCTCC (Motif 22)

T G A C G T C A T A G C T C G A C A T G A T C G T G A C A G C T A G T C T A G C
Reverse Opposite:
A T C G T C A G C T G A A C T G T A G C G T A C A G C T A T C G C A G T A C T G
p-value:1e-5
log p-value:-1.281e+01
Information Content per bp:1.654
Number of Target Sequences with motif73.0
Percentage of Target Sequences with motif8.84%
Number of Background Sequences with motif2456.5
Percentage of Background Sequences with motif5.00%
Average Position of motif in Targets45.8 +/- 28.7bp
Average Position of motif in Background49.8 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.68
Offset:5
Orientation:forward strand
Alignment:CACAGGCTCC-
-----GCTCCG
 T G A C G T C A T A G C T C G A C A T G A T C G T G A C A G C T A G T C T A G C A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CACAGGCTCC
CACAGN----
 T G A C G T C A T A G C T C G A C A T G A T C G T G A C A G C T A G T C T A G C
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CACAGGCTCC
GCTCGGSCTC-
 A C G T T G A C G T C A T A G C T C G A C A T G A T C G T G A C A G C T A G T C T A G C
C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T

NRF1/MA0506.1/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CACAGGCTCC
TGCGCAGGCGC-
 A C G T A C G T T G A C G T C A T A G C T C G A C A T G A T C G T G A C A G C T A G T C T A G C
A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CACAGGCTCC
AGCCTCAGGCA--
 A C G T A C G T A C G T T G A C G T C A T A G C T C G A C A T G A T C G T G A C A G C T A G T C T A G C
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CACAGGCTCC
CGCCTCAGGCA--
 A C G T A C G T A C G T T G A C G T C A T A G C T C G A C A T G A T C G T G A C A G C T A G T C T A G C
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:7
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CACAGGCTCC
AAACCACAGAN---
 A C G T A C G T A C G T A C G T T G A C G T C A T A G C T C G A C A T G A T C G T G A C A G C T A G T C T A G C
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CACAGGCTCC
----NGCTN-
 T G A C G T C A T A G C T C G A C A T G A T C G T G A C A G C T A G T C T A G C
A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CACAGGCTCC
AGCCTCAGGCA--
 A C G T A C G T A C G T T G A C G T C A T A G C T C G A C A T G A T C G T G A C A G C T A G T C T A G C
G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CACAGGCTCC
GTCACATGAY--
 A C G T A C G T T G A C G T C A T A G C T C G A C A T G A T C G T G A C A G C T A G T C T A G C
T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C A C G T A C G T