Information for 6-CGGCTAATTT (Motif 21)

A G T C T C A G A C T G A G T C A C G T C G T A C G T A A C G T A C G T A C G T
Reverse Opposite:
G T C A G T C A C G T A C G A T C G A T C G T A A C T G A G T C A G T C A C T G
p-value:1e-5
log p-value:-1.314e+01
Information Content per bp:1.880
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif21.7
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets50.4 +/- 23.3bp
Average Position of motif in Background60.7 +/- 24.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0032.1_Evx2/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CGGCTAATTT-----
CACCGCTAATTAGCGGT
 A C G T A C G T A G T C T C A G A C T G A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G T C T G C A G A T C G T A C T C A G A T G C A G C T T G C A C G T A A C G T A C G T C T G A A T C G A T G C A C T G A C G T G C A T

GBX1/MA0889.1/Jaspar

Match Rank:2
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:CGGCTAATTT--
--GCTAATTAGN
 A G T C T C A G A C T G A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C A G A T G C C G A T C T G A C T G A A C G T A G C T C T G A T A C G A G C T

PH0098.1_Lhx8/Jaspar

Match Rank:3
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CGGCTAATTT-----
CACCGCTAATTAGNNGN
 A C G T A C G T A G T C T C A G A C T G A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A T C T G C A G T A C G T A C T C A G T G A C G A C T T C G A C T G A A G C T A G C T C T G A A C T G A C T G A C T G A C T G C G A T

Dlx1/MA0879.1/Jaspar

Match Rank:4
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CGGCTAATTT--
--NNTAATTANN
 A G T C T C A G A C T G A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A C G T G C A C G A T T G C A G C T A C G A T A C G T C T G A A C T G A C T G

HESX1/MA0894.1/Jaspar

Match Rank:5
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CGGCTAATTT--
--GCTAATTGGC
 A G T C T C A G A C T G A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C A G G A T C C G A T C T G A T C G A A C G T A G C T C T A G T C A G G A T C

GBX2/MA0890.1/Jaspar

Match Rank:6
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CGGCTAATTT--
--NNTAATTGNN
 A G T C T C A G A C T G A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A C G A G T C C G A T T G C A T G C A A C G T A G C T C T A G T A C G A G C T

ESX1/MA0644.1/Jaspar

Match Rank:7
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CGGCTAATTT--
--GNTAATTGGN
 A G T C T C A G A C T G A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A G C T C G A T C T G A C T G A C A G T A G C T C T A G C T A G A G C T

EN2/MA0642.1/Jaspar

Match Rank:8
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CGGCTAATTT--
--GNTAATTGGN
 A G T C T C A G A C T G A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A C G A T G C A G C T T C G A C G T A A C G T A C G T T C A G T A C G A T C G

PH0131.1_Pax4/Jaspar

Match Rank:9
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CGGCTAATTT-----
NNGNGCTAATTAGNTNA
 A C G T A C G T A G T C T C A G A C T G A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A T G G A C T A T C G T C A G C T A G A G T C C A G T C G T A C T G A A G C T G A C T G T C A C T A G G C A T A G C T A T G C C G T A

RAX/MA0718.1/Jaspar

Match Rank:10
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CGGCTAATTT--
--NTTAATTGNN
 A G T C T C A G A C T G A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G G A C T G C A T C G T A C G T A C A G T C G A T C T A G T C A G A G T C