Information for 8-CGCTGCAGAGTGACGC (Motif 15)

A T G C A C T G A T G C G C A T A C T G A G T C G T C A A C T G T C G A A T C G C A G T A T C G T C G A T G A C T A C G T A G C
Reverse Opposite:
A C T G A G T C A C T G A G C T A T G C G T C A A T G C A G C T A G T C A C G T A C T G T A G C C G T A A T C G G T A C A T C G
p-value:1e-7
log p-value:-1.714e+01
Information Content per bp:1.707
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.18%
Number of Background Sequences with motif210.9
Percentage of Background Sequences with motif0.43%
Average Position of motif in Targets42.6 +/- 24.8bp
Average Position of motif in Background51.0 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZIC3/MA0697.1/Jaspar

Match Rank:1
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CGCTGCAGAGTGACGC
NCGCAGCGGGGGGTC--
 A C G T A T G C A C T G A T G C G C A T A C T G A G T C G T C A A C T G T C G A A T C G C A G T A T C G T C G A T G A C T A C G T A G C
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C A C G T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CGCTGCAGAGTGACGC
CACAGCGGGGGGTC--
 A T G C A C T G A T G C G C A T A C T G A G T C G T C A A C T G T C G A A T C G C A G T A T C G T C G A T G A C T A C G T A G C
T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CGCTGCAGAGTGACGC
DCHCAGCAGGRGGCC--
 A C G T A T G C A C T G A T G C G C A T A C T G A G T C G T C A A C T G T C G A A T C G C A G T A T C G T C G A T G A C T A C G T A G C
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CGCTGCAGAGTGACGC
NCNCAGCGGGGGGTC--
 A C G T A T G C A C T G A T G C G C A T A C T G A G T C G T C A A C T G T C G A A T C G C A G T A T C G T C G A T G A C T A C G T A G C
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CGCTGCAGAGTGACGC
CACAGCAGGGGG----
 A T G C A C T G A T G C G C A T A C T G A G T C G T C A A C T G T C G A A T C G C A G T A T C G T C G A T G A C T A C G T A G C
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:6
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CGCTGCAGAGTGACGC
NNNANTGCAGTGCNNTT-
 A C G T A C G T A T G C A C T G A T G C G C A T A C T G A G T C G T C A A C T G T C G A A T C G C A G T A T C G T C G A T G A C T A C G T A G C
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T A C G T

Bach1::Mafk/MA0591.1/Jaspar

Match Rank:7
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CGCTGCAGAGTGACGC-
--NTGCTGAGTCATCCN
 A T G C A C T G A T G C G C A T A C T G A G T C G T C A A C T G T C G A A T C G C A G T A T C G T C G A T G A C T A C G T A G C A C G T
A C G T A C G T T A C G G A C T A C T G A T G C G A C T A C T G G T C A A T C G C G A T G T A C C G T A A G C T A T G C T A G C A G C T

PAX9/MA0781.1/Jaspar

Match Rank:8
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--CGCTGCAGAGTGACGC
TGCAGTCATGCGTGACG-
 A C G T A C G T A T G C A C T G A T G C G C A T A C T G A G T C G T C A A C T G T C G A A T C G C A G T A T C G T C G A T G A C T A C G T A G C
C A G T A C T G G T A C C T G A A T C G A G C T A T G C C T G A C G A T A T C G A G T C C T A G A C G T C T A G C G T A G T A C T A C G A C G T

PAX1/MA0779.1/Jaspar

Match Rank:9
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--CGCTGCAGAGTGACGC
NGCANTCATGCGTGACG-
 A C G T A C G T A T G C A C T G A T G C G C A T A C T G A G T C G T C A A C T G T C G A A T C G C A G T A T C G T C G A T G A C T A C G T A G C
C A G T A C T G G T A C C T G A A T C G A G C T T A G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A G T A C T A C G A C G T

GLIS2/MA0736.1/Jaspar

Match Rank:10
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:CGCTGCAGAGTGACGC
CTTCGCGGGGGGTC--
 A T G C A C T G A T G C G C A T A C T G A G T C G T C A A C T G T C G A A T C G C A G T A T C G T C G A T G A C T A C G T A G C
T A G C C A G T G A C T G A T C T C A G G A T C C T A G C A T G A C T G C T A G C A T G C T A G A G C T T G A C A C G T A C G T