Information for 3-GCTCCCCGCAGGG (Motif 7)

A T C G A T G C A C G T A T G C A G T C T A G C A G T C A C T G G T A C C T G A A C T G T A C G A T C G
Reverse Opposite:
T A G C A T G C A G T C A G C T A C T G A G T C A C T G A T C G A C T G A T C G T G C A A T C G A T G C
p-value:1e-6
log p-value:-1.572e+01
Information Content per bp:1.766
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif3.37%
Number of Background Sequences with motif332.0
Percentage of Background Sequences with motif0.69%
Average Position of motif in Targets42.8 +/- 24.9bp
Average Position of motif in Background49.9 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZIC4/MA0751.1/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GCTCCCCGCAGGG-
GACCCCCCGCTGTGC
 A C G T A T C G A T G C A C G T A T G C A G T C T A G C A G T C A C T G G T A C C T G A A C T G T A C G A T C G A C G T
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

ZIC3/MA0697.1/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GCTCCCCGCAGGG-
GACCCCCCGCTGCGC
 A C G T A T C G A T G C A C G T A T G C A G T C T A G C A G T C A C T G G T A C C T G A A C T G T A C G A T C G A C G T
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

PB0199.1_Zfp161_2/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GCTCCCCGCAGGG---
--GCCGCGCAGTGCGT
 A T C G A T G C A C G T A T G C A G T C T A G C A G T C A C T G G T A C C T G A A C T G T A C G A T C G A C G T A C G T A C G T
A C G T A C G T C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GCTCCCCGCAGGG-
GGCCYCCTGCTGDGH
 A C G T A T C G A T G C A C G T A T G C A G T C T A G C A G T C A C T G G T A C C T G A A C T G T A C G A T C G A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

ZIC1/MA0696.1/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GCTCCCCGCAGGG
GACCCCCCGCTGTG
 A C G T A T C G A T G C A C G T A T G C A G T C T A G C A G T C A C T G G T A C C T G A A C T G T A C G A T C G
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G

PB0103.1_Zic3_1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCTCCCCGCAGGG-
NCCCCCCCGGGGGGN
 A C G T A T C G A T G C A C G T A T G C A G T C T A G C A G T C A C T G G T A C C T G A A C T G T A C G A T C G A C G T
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GCTCCCCGCAGGG-
--TGCCCCCGGGCA
 A T C G A T G C A C G T A T G C A G T C T A G C A G T C A C T G G T A C C T G A A C T G T A C G A T C G A C G T
A C G T A C G T G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A

PB0102.1_Zic2_1/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCTCCCCGCAGGG-
ACCCCCCCGGGGGGN
 A C G T A T C G A T G C A C G T A T G C A G T C T A G C A G T C A C T G G T A C C T G A A C T G T A C G A T C G A C G T
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GCTCCCCGCAGGG--
--TGCCCNNAGGGCA
 A T C G A T G C A C G T A T G C A G T C T A G C A G T C A C T G G T A C C T G A A C T G T A C G A T C G A C G T A C G T
A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A

GLIS2/MA0736.1/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCTCCCCGCAGGG
GACCCCCCGCGAAG
 A C G T A T C G A T G C A C G T A T G C A G T C T A G C A G T C A C T G G T A C C T G A A C T G T A C G A T C G
A C T G T C G A A G T C G T A C G A T C G T A C G T A C G A T C C T A G A G T C C T A G C T G A G T C A A T C G