Information for 1-GCTCTGCGGCCAT (Motif 5)

A T C G A G T C A C G T A G T C A C G T A C T G A G T C A C T G A C T G A G T C A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G A C T G G T A C G T A C A C T G A G T C C G T A A C T G C G T A A C T G A T G C
p-value:1e-9
log p-value:-2.141e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets68.0 +/- 26.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:GCTCTGCGGCCAT----
-----GCNGCCATCTTG
 A T C G A G T C A C G T A G T C A C G T A C T G A G T C A C T G A C T G A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:GCTCTGCGGCCAT----
-----GCCGCCATCTTG
 A T C G A G T C A C G T A G T C A C G T A C T G A G T C A C T G A C T G A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GCTCTGCGGCCAT--
----GTCCGCCATTA
 A T C G A G T C A C G T A G T C A C G T A C T G A G T C A C T G A C T G A G T C A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.51
Offset:7
Orientation:forward strand
Alignment:GCTCTGCGGCCAT----
-------GGCCATTAAC
 A T C G A G T C A C G T A G T C A C G T A C T G A G T C A C T G A C T G A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:GCTCTGCGGCCAT
GCTCGGSCTC---
 A T C G A G T C A C G T A G T C A C G T A C T G A G T C A C T G A C T G A G T C A G T C C G T A A C G T
C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:6
Score:0.49
Offset:0
Orientation:forward strand
Alignment:GCTCTGCGGCCAT
GCTCCG-------
 A T C G A G T C A C G T A G T C A C G T A C T G A G T C A C T G A C T G A G T C A G T C C G T A A C G T
A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:7
Score:0.49
Offset:-4
Orientation:forward strand
Alignment:----GCTCTGCGGCCAT
AATCGCACTGCATTCCG
 A C G T A C G T A C G T A C G T A T C G A G T C A C G T A G T C A C G T A C T G A G T C A C T G A C T G A G T C A G T C C G T A A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:8
Score:0.47
Offset:0
Orientation:reverse strand
Alignment:GCTCTGCGGCCAT
GCTCCGCCCMCY-
 A T C G A G T C A C G T A G T C A C G T A C T G A G T C A C T G A C T G A G T C A G T C C G T A A C G T
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:9
Score:0.47
Offset:7
Orientation:reverse strand
Alignment:GCTCTGCGGCCAT
-------TGCCAA
 A T C G A G T C A C G T A G T C A C G T A C T G A G T C A C T G A C T G A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:10
Score:0.47
Offset:-1
Orientation:forward strand
Alignment:-GCTCTGCGGCCAT
TGCCCTGAGGGCA-
 A C G T A T C G A G T C A C G T A G T C A C G T A C T G A G T C A C T G A C T G A G T C A G T C C G T A A C G T
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T