Information for 5-GCCGYTGGGG (Motif 16)

A C T G A T G C A T G C A T C G A G C T A G C T A T C G A C T G T A C G A C T G
Reverse Opposite:
A G T C A T G C T G A C T A G C T C G A T C G A A T G C T A C G T A C G G T A C
p-value:1e-1
log p-value:-3.945e+00
Information Content per bp:1.714
Number of Target Sequences with motif42.0
Percentage of Target Sequences with motif8.30%
Number of Background Sequences with motif2856.0
Percentage of Background Sequences with motif5.94%
Average Position of motif in Targets47.5 +/- 27.2bp
Average Position of motif in Background50.0 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GCCGYTGGGG--
TGCCCTGAGGGCA
 A C G T A C T G A T G C A T G C A T C G A G C T A G C T A T C G A C T G T A C G A C T G A C G T A C G T
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:2
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GCCGYTGGGG--
TGCCCTNAGGGCA
 A C G T A C T G A T G C A T G C A T C G A G C T A G C T A T C G A C T G T A C G A C T G A C G T A C G T
G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:3
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GCCGYTGGGG--
TGCCCTGAGGGCA
 A C G T A C T G A T G C A T G C A T C G A G C T A G C T A T C G A C T G T A C G A C T G A C G T A C G T
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:4
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GCCGYTGGGG-
TGCCCNGGGGCA
 A C G T A C T G A T G C A T G C A T C G A G C T A G C T A T C G A C T G T A C G A C T G A C G T
G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GCCGYTGGGG--
TCCCCTGGGGAC
 A C T G A T G C A T G C A T C G A G C T A G C T A T C G A C T G T A C G A C T G A C G T A C G T
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C

MZF1/MA0056.1/Jaspar

Match Rank:6
Score:0.64
Offset:5
Orientation:forward strand
Alignment:GCCGYTGGGG-
-----TGGGGA
 A C T G A T G C A T G C A T C G A G C T A G C T A T C G A C T G T A C G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A

TFAP2B/MA0811.1/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GCCGYTGGGG-
TGCCCTNGGGCA
 A C G T A C T G A T G C A T G C A T C G A G C T A G C T A T C G A C T G T A C G A C T G A C G T
G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A

ZIC3/MA0697.1/Jaspar

Match Rank:8
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GCCGYTGGGG---
NCGCAGCGGGGGGTC
 A C G T A C G T A C T G A T G C A T G C A T C G A G C T A G C T A T C G A C T G T A C G A C T G A C G T A C G T A C G T
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

GLIS2/MA0736.1/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GCCGYTGGGG---
CTTCGCGGGGGGTC
 A C G T A C T G A T G C A T G C A T C G A G C T A G C T A T C G A C T G T A C G A C T G A C G T A C G T A C G T
T A G C C A G T G A C T G A T C T C A G G A T C C T A G C A T G A C T G C T A G C A T G C T A G A G C T T G A C

TFAP2C/MA0524.2/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GCCGYTGGGG-
TGCCCTNGGGCA
 A C G T A C T G A T G C A T G C A T C G A G C T A G C T A T C G A C T G T A C G A C T G A C G T
G A C T T A C G A T G C G A T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A