Information for 1-CCGCGGCGTCGCG (Motif 6)

A T G C A G T C A T C G A G T C A C T G A C T G A G T C A T C G A C G T A G T C A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C A C T G T G C A A T G C A C T G A G T C G T A C A C T G A T G C A C T G A T C G
p-value:1e-13
log p-value:-3.029e+01
Information Content per bp:1.896
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.74%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets46.8 +/- 20.9bp
Average Position of motif in Background7.8 +/- 2.2bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CCGCGGCGTCGCG
GGGGCCGAGGCCTG---
 A C G T A C G T A C G T A C G T A T G C A G T C A T C G A G T C A C T G A C T G A G T C A T C G A C G T A G T C A C T G A G T C A C T G
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T A C G T

PB0179.1_Sp100_2/Jaspar

Match Rank:2
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CCGCGGCGTCGCG------
----TCCGTCGCTTAAAAG
 A T G C A G T C A T C G A G T C A C T G A C T G A G T C A T C G A C G T A G T C A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A T G C G A T C T C A G G C A T T G A C A C T G G A T C A C G T C A G T G C T A C G T A G C T A C G T A A C T G

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CCGCGGCGTCGCG
GCTCGGSCTC---
 A T G C A G T C A T C G A G T C A C T G A C T G A G T C A T C G A C G T A G T C A C T G A G T C A C T G
C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T A C G T

ZBTB33/MA0527.1/Jaspar

Match Rank:4
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:CCGCGGCGTCGCG----
--NAGNTCTCGCGAGAN
 A T G C A G T C A T C G A G T C A C T G A C T G A G T C A T C G A C G T A G T C A C T G A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T T A G C T C G A T C A G T C G A A G C T T G A C A G C T A G T C C T A G G A T C A C T G C T G A A C T G T C G A T C A G

NRF1/MA0506.1/Jaspar

Match Rank:5
Score:0.50
Offset:2
Orientation:forward strand
Alignment:CCGCGGCGTCGCG
--GCGCCTGCGCA
 A T G C A G T C A T C G A G T C A C T G A C T G A G T C A T C G A C G T A G T C A C T G A G T C A C T G
A C G T A C G T T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:6
Score:0.49
Offset:3
Orientation:forward strand
Alignment:CCGCGGCGTCGCG
---AGGCCTAG--
 A T G C A G T C A T C G A G T C A C T G A C T G A G T C A T C G A C G T A G T C A C T G A G T C A C T G
A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T

GLIS2/MA0736.1/Jaspar

Match Rank:7
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---CCGCGGCGTCGCG
GACCCCCCGCGAAG--
 A C G T A C G T A C G T A T G C A G T C A T C G A G T C A C T G A C T G A G T C A T C G A C G T A G T C A C T G A G T C A C T G
A C T G T C G A A G T C G T A C G A T C G T A C G T A C G A T C C T A G A G T C C T A G C T G A G T C A A T C G A C G T A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:8
Score:0.49
Offset:7
Orientation:forward strand
Alignment:CCGCGGCGTCGCG--------
-------GCCGCGCAGTGCGT
 A T G C A G T C A T C G A G T C A C T G A C T G A G T C A T C G A C G T A G T C A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

Sp1(Zf)/Promoter/Homer

Match Rank:9
Score:0.48
Offset:1
Orientation:reverse strand
Alignment:CCGCGGCGTCGCG
-GGGGGCGGGGCC
 A T G C A G T C A T C G A G T C A C T G A C T G A G T C A T C G A C G T A G T C A C T G A G T C A C T G
A C G T T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:10
Score:0.48
Offset:1
Orientation:forward strand
Alignment:CCGCGGCGTCGCG
-MKGGGYGTGGCC
 A T G C A G T C A T C G A G T C A C T G A C T G A G T C A T C G A C G T A G T C A C T G A G T C A C T G
A C G T G T A C C A G T A C T G A C T G A C T G G A T C A C T G A C G T A C T G A C T G A G T C G A T C