Information for 10-GTATAABHTTTHAATT (Motif 20)

C A T G C G A T G C T A C G A T C T G A C T G A A C G T G C T A C G A T A G C T C G A T G A T C C G T A C G T A A C G T A C G T
Reverse Opposite:
G T C A C G T A C G A T A C G T C T A G C G T A C T G A G C T A C G A T T G C A G A C T A G C T C G T A C G A T C G T A G T A C
p-value:1e-7
log p-value:-1.826e+01
Information Content per bp:1.722
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.16%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets44.8 +/- 17.3bp
Average Position of motif in Background65.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.67
Offset:7
Orientation:forward strand
Alignment:GTATAABHTTTHAATT
-------ATTTGAATT
 C A T G C G A T G C T A C G A T C T G A C T G A A C G T G C T A C G A T A G C T C G A T G A T C C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

PB0068.1_Sox1_1/Jaspar

Match Rank:2
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:GTATAABHTTTHAATT----
----NNNTATTGAATTGNNN
 C A T G C G A T G C T A C G A T C T G A C T G A A C G T G C T A C G A T A G C T C G A T G A T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T

Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:3
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GTATAABHTTTHAATT------
--NTAATTDGCYAATTANNWWD
 C A T G C G A T G C T A C G A T C T G A C T G A A C G T G C T A C G A T A G C T C G A T G A T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T G A C T T C G A C G T A C G A T A G C T C T G A A C T G T G A C G A C T T C G A C G T A A C G T A G C T C T G A C T G A G T C A G C T A G C T A C G T A

PH0101.1_Lmx1b/Jaspar

Match Rank:4
Score:0.59
Offset:5
Orientation:forward strand
Alignment:GTATAABHTTTHAATT------
-----AGTTTTTAATTAATTTG
 C A T G C G A T G C T A C G A T C T G A C T G A A C G T G C T A C G A T A G C T C G A T G A T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C T A G C G A T C G A T G C A T A G C T G A C T G C T A C G T A G C A T C G A T C G T A C T G A C G A T C G A T G A C T A C T G

PH0100.1_Lmx1a/Jaspar

Match Rank:5
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:GTATAABHTTTHAATT------
-----NNTTTTTAATTAATTCG
 C A T G C G A T G C T A C G A T C T G A C T G A A C G T G C T A C G A T A G C T C G A T G A T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G C T A G C G A T C G A T G C A T G A C T G A C T C G T A C G T A C G A T C G A T C T G A C T G A C G A T C G A T A T G C A T C G

PH0095.1_Lhx5/Jaspar

Match Rank:6
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:GTATAABHTTTHAATT------
-----ANNATTTAATTAATTNN
 C A T G C G A T G C T A C G A T C T G A C T G A A C G T G C T A C G A T A G C T C G A T G A T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C A T G C A G T C G T A C G A T G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G A C T C A G T G A T C A T C G

PB0001.1_Arid3a_1/Jaspar

Match Rank:7
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:GTATAABHTTTHAATT------
-----NNNTTTTAATTAANNNN
 C A T G C G A T G C T A C G A T C T G A C T G A A C G T G C T A C G A T A G C T C G A T G A T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G C G T A C G T A C A G T G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A T G A C T A G C A T G C

Arid3b/MA0601.1/Jaspar

Match Rank:8
Score:0.58
Offset:7
Orientation:forward strand
Alignment:GTATAABHTTTHAATT--
-------ATATTAATTAA
 C A T G C G A T G C T A C G A T C T G A C T G A A C G T G C T A C G A T A G C T C G A T G A T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:9
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GTATAABHTTTHAATT
---TGACCTTTNCNT-
 C A T G C G A T G C T A C G A T C T G A C T G A A C G T G C T A C G A T A G C T C G A T G A T C C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T A C G T

Hoxd9/MA0913.1/Jaspar

Match Rank:10
Score:0.58
Offset:8
Orientation:reverse strand
Alignment:GTATAABHTTTHAATT--
--------TTTTTATTGC
 C A T G C G A T G C T A C G A T C T G A C T G A A C G T G C T A C G A T A G C T C G A T G A T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T G C A T C A G T C G A T C G A T C G T A G A C T A C G T C T A G A G T C