Information for 10-ATTGTTWTAAKWG (Motif 18)

C G T A A C G T A C G T A C T G C G A T C G A T C G T A A G C T C G T A C G T A A C G T C G T A C T A G
Reverse Opposite:
A G T C C G A T G T C A A C G T G A C T C T G A C G A T C G T A G C T A G T A C C G T A C G T A C G A T
p-value:1e-7
log p-value:-1.826e+01
Information Content per bp:1.764
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.16%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.2 +/- 24.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0062.1_Sox12_1/Jaspar

Match Rank:1
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--ATTGTTWTAAKWG
TAATTGTTCTAAAC-
 A C G T A C G T C G T A A C G T A C G T A C T G C G A T C G A T C G T A A G C T C G T A C G T A A C G T C G T A C T A G
G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:2
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----ATTGTTWTAAKWG
TTCAATTGTTCTAAAA-
 A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C T G C G A T C G A T C G T A A G C T C G T A C G T A A C G T C G T A C T A G
A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A A C G T

SRY/MA0084.1/Jaspar

Match Rank:3
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:ATTGTTWTAAKWG
ATTGTTTAN----
 C G T A A C G T A C G T A C T G C G A T C G A T C G T A A G C T C G T A C G T A A C G T C G T A C T A G
G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C A C G T A C G T A C G T A C G T

PB0123.1_Foxl1_2/Jaspar

Match Rank:4
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---ATTGTTWTAAKWG
NNTTTTGTTTTGATNT
 A C G T A C G T A C G T C G T A A C G T A C G T A C T G C G A T C G A T C G T A A G C T C G T A C G T A A C G T C G T A C T A G
C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T

Sox5/MA0087.1/Jaspar

Match Rank:5
Score:0.68
Offset:0
Orientation:forward strand
Alignment:ATTGTTWTAAKWG
ATTGTTA------
 C G T A A C G T A C G T A C T G C G A T C G A T C G T A A G C T C G T A C G T A A C G T C G T A C T A G
C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:6
Score:0.68
Offset:0
Orientation:forward strand
Alignment:ATTGTTWTAAKWG
ATTGTT-------
 C G T A A C G T A C G T A C T G C G A T C G A T C G T A A G C T C G T A C G T A A C G T C G T A C T A G
G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0073.1_Sox7_1/Jaspar

Match Rank:7
Score:0.66
Offset:-9
Orientation:reverse strand
Alignment:---------ATTGTTWTAAKWG
TNNANNTCTATTGTTNTNNANN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C T G C G A T C G A T C G T A A G C T C G T A C G T A A C G T C G T A C T A G
C G A T T C A G C G T A C G T A C T G A C G A T C G A T A G T C G A C T C G T A A G C T C G A T T C A G C G A T G A C T G A T C G C A T C G A T G A C T T G C A C G A T C A G T

PB0072.1_Sox5_1/Jaspar

Match Rank:8
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----ATTGTTWTAAKWG
NNTTTATTGTTCTNNN--
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C T G C G A T C G A T C G T A A G C T C G T A C G T A A C G T C G T A C T A G
G C T A C G A T G C A T G A C T G C A T C G T A G A C T G C A T C T A G G A C T A G C T G A T C G A C T G C T A C G T A G C T A A C G T A C G T

PB0063.1_Sox13_1/Jaspar

Match Rank:9
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----ATTGTTWTAAKWG
AANTTATTGTTCTNNA--
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C T G C G A T C G A T C G T A A G C T C G T A C G T A A C G T C G T A C T A G
C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A A C G T A C G T

PB0074.1_Sox8_1/Jaspar

Match Rank:10
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------ATTGTTWTAAKWG
GTATCTATTGTTCTTTA--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C T G C G A T C G A T C G T A A G C T C G T A C G T A A C G T C G T A C T A G
C A G T C A G T C G T A C G A T A G C T G C A T C G T A G A C T C G A T T C A G C G A T G A C T G T A C G C A T C A G T C G A T C G T A A C G T A C G T