Information for 1-AGCGCCGACA (Motif 1)

C T G A A C T G A G T C T A C G A G T C T A G C A C T G C G T A A T G C T C G A
Reverse Opposite:
A C G T T A C G A C G T A G T C A C T G A C T G A G T C A C T G A G T C A G C T
p-value:1e-16
log p-value:-3.893e+01
Information Content per bp:1.850
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif2.51%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets46.0 +/- 25.1bp
Average Position of motif in Background57.8 +/- 15.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0112.1_E2F2_2/Jaspar

Match Rank:1
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------AGCGCCGACA-
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G A G T C T A C G A G T C T A G C A C T G C G T A A T G C T C G A A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

PB0113.1_E2F3_2/Jaspar

Match Rank:2
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------AGCGCCGACA-
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G A G T C T A C G A G T C T A G C A C T G C G T A A T G C T C G A A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AGCGCCGACA
-GCTCCG---
 C T G A A C T G A G T C T A C G A G T C T A G C A C T G C G T A A T G C T C G A
A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGCGCCGACA
CAGCC------
 A C G T C T G A A C T G A G T C T A C G A G T C T A G C A C T G C G T A A T G C T C G A
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

E2F1/MA0024.3/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AGCGCCGACA
TTTGGCGCCAAA-
 A C G T A C G T A C G T C T G A A C T G A G T C T A C G A G T C T A G C A C T G C G T A A T G C T C G A
G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGCGCCGACA--
GGTGYTGACAGS
 C T G A A C T G A G T C T A C G A G T C T A G C A C T G C G T A A T G C T C G A A C G T A C G T
T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:AGCGCCGACA-
---CCAGACAG
 C T G A A C T G A G T C T A C G A G T C T A G C A C T G C G T A A T G C T C G A A C G T
A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:AGCGCCGACA---
---CCAGACRSVB
 C T G A A C T G A G T C T A C G A G T C T A G C A C T G C G T A A T G C T C G A A C G T A C G T A C G T
A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

POL006.1_BREu/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AGCGCCGACA
AGCGCGCC----
 A C G T A C G T C T G A A C T G A G T C T A C G A G T C T A G C A C T G C G T A A T G C T C G A
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AGCGCCGACA
AAAATGCTGACT
 A C G T A C G T C T G A A C T G A G T C T A C G A G T C T A G C A C T G C G T A A T G C T C G A
C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T