Information for 4-GCCGCCAAGGCTTTTT (Motif 5)

A C T G A G T C A G T C A C T G A G T C A G T C C T G A G T C A A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T
Reverse Opposite:
C G T A G T C A C G T A G T C A G T C A A C T G A G T C A G T C C A G T A G C T A C T G A C T G A G T C A C T G A C T G A G T C
p-value:1e-10
log p-value:-2.433e+01
Information Content per bp:1.939
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.5 +/- 30.3bp
Average Position of motif in Background33.9 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GCCGCCAAGGCTTTTT
GGGGCCGAGGCCTG--
 A C T G A G T C A G T C A C T G A G T C A G T C C T G A G T C A A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:2
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----GCCGCCAAGGCTTTTT
CCTTCGGCGCCAAAAGG----
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A C T G A G T C A G T C C T G A G T C A A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G A C G T A C G T A C G T A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GCCGCCAAGGCTTTTT
TGCCCTGAGGGCA----
 A C G T A C T G A G T C A G T C A C T G A G T C A G T C C T G A G T C A A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T
G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:4
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----GCCGCCAAGGCTTTTT
AGCTCGGCGCCAAAAGC----
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A C T G A G T C A G T C C T G A G T C A A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C A C G T A C G T A C G T A C G T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GCCGCCAAGGCTTTTT
TGCCCTNAGGGCA----
 A C G T A C T G A G T C A G T C A C T G A G T C A G T C C T G A G T C A A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:6
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCCGCCAAGGCTTTTT
TGCCCNNAGGGCA----
 A C G T A C T G A G T C A G T C A C T G A G T C A G T C C T G A G T C A A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T

EGR2/MA0472.2/Jaspar

Match Rank:7
Score:0.51
Offset:1
Orientation:forward strand
Alignment:GCCGCCAAGGCTTTTT
-ACGCCCACGCA----
 A C T G A G T C A G T C A C T G A G T C A G T C C T G A G T C A A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G T C A A G T C C T A G A G T C T G A C A G T C T G C A A G T C C A T G A G T C C T G A A C G T A C G T A C G T A C G T

EGR4/MA0733.1/Jaspar

Match Rank:8
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-GCCGCCAAGGCTTTTT
TTACGCCCACGCATTT-
 A C G T A C T G A G T C A G T C A C T G A G T C A G T C C T G A G T C A A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T
G A C T G A C T G T C A A G T C C A T G A G T C T G A C A G T C G T C A A G T C A T C G A G T C T G C A G C A T G C A T G C A T A C G T

PB0010.1_Egr1_1/Jaspar

Match Rank:9
Score:0.50
Offset:0
Orientation:forward strand
Alignment:GCCGCCAAGGCTTTTT
TCCGCCCCCGCATT--
 A C T G A G T C A G T C A C T G A G T C A G T C C T G A G T C A A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T
G A C T G T A C G A T C T C A G A G T C A T G C A G T C G T A C G A T C A C T G A G T C C G T A G A C T A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:10
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----GCCGCCAAGGCTTTTT
TACGCCCCGCCACTCTG----
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A C T G A G T C A G T C C T G A G T C A A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G A C G T A C G T A C G T A C G T