p-value: | 1e-4 |
log p-value: | -9.525e+00 |
Information Content per bp: | 1.864 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.69% |
Number of Background Sequences with motif | 38.0 |
Percentage of Background Sequences with motif | 0.08% |
Average Position of motif in Targets | 59.6 +/- 23.8bp |
Average Position of motif in Background | 50.4 +/- 22.5bp |
Strand Bias (log2 ratio + to - strand density) | -0.3 |
Multiplicity (# of sites on avg that occur together) | 1.33 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer
Match Rank: | 1 |
Score: | 0.90 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GGAATTTCCT GGGAATTTCC- |
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RELA/MA0107.1/Jaspar
Match Rank: | 2 |
Score: | 0.89 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GGAATTTCCT GGGAATTTCC- |
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REL/MA0101.1/Jaspar
Match Rank: | 3 |
Score: | 0.83 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GGAATTTCCT GGGGATTTCC- |
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MF0003.1_REL_class/Jaspar
Match Rank: | 4 |
Score: | 0.80 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GGAATTTCCT GGGGATTTCC- |
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NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer
Match Rank: | 5 |
Score: | 0.79 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GGAATTTCCT NGGGGATTTCCC |
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EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer
Match Rank: | 6 |
Score: | 0.75 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | GGAATTTCCT--- ---ATTTCCTGTN |
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TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 7 |
Score: | 0.69 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GGAATTTCCT NCTGGAATGC--- |
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TEAD4/MA0809.1/Jaspar
Match Rank: | 8 |
Score: | 0.68 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GGAATTTCCT NTGGAATGTN-- |
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EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer
Match Rank: | 9 |
Score: | 0.68 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GGAATTTCCT--- ---ATTTCCTGTN |
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ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer
Match Rank: | 10 |
Score: | 0.68 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GGAATTTCCT--- ---ACTTCCTGNT |
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