Information for 1-GCCGGGAGAGGGA (Motif 2)

A C T G A G T C A G T C C T A G A C T G A C T G C G T A A T C G C G T A A C T G A C T G A T C G C G T A
Reverse Opposite:
A C G T A T G C A G T C A G T C G C A T A T G C A C G T A G T C A G T C A G T C C T A G A C T G A G T C
p-value:1e-12
log p-value:-2.778e+01
Information Content per bp:1.889
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.27%
Number of Background Sequences with motif23.7
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets55.6 +/- 22.6bp
Average Position of motif in Background48.9 +/- 19.7bp
Strand Bias (log2 ratio + to - strand density)-1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0114.1_Egr1_2/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GCCGGGAGAGGGA----
-TGCGGAGTGGGACTGG
 A C T G A G T C A G T C C T A G A C T G A C T G C G T A A T C G C G T A A C T G A C T G A T C G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

ELK4/MA0076.2/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCCGGGAGAGGGA
NCCGGAAGTGG--
 A C T G A G T C A G T C C T A G A C T G A C T G C G T A A T C G C G T A A C T G A C T G A T C G C G T A
T C A G T A G C G T A C A C T G A C T G C G T A C G T A T C A G G A C T T A C G T A C G A C G T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GCCGGGAGAGGGA
NNNACCGAGAGTNNN-
 A C G T A C G T A C G T A C T G A G T C A G T C C T A G A C T G A C T G C G T A A T C G C G T A A C T G A C T G A T C G C G T A
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T A C G T

Gabpa/MA0062.2/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GCCGGGAGAGGGA
-CCGGAAGTGGC-
 A C T G A G T C A G T C C T A G A C T G A C T G C G T A A T C G C G T A A C T G A C T G A T C G C G T A
A C G T T A G C T G A C A C T G A C T G T C G A G C T A T C A G G A C T T C A G T C A G T G A C A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCCGGGAGAGGGA-------
GCCASCAGGGGGCGCYVNNG
 A C T G A G T C A G T C C T A G A C T G A C T G C G T A A T C G C G T A A C T G A C T G A T C G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GCCGGGAGAGGGA
---GGGGGGGG--
 A C T G A G T C A G T C C T A G A C T G A C T G C G T A A T C G C G T A A C T G A C T G A T C G C G T A
A C G T A C G T A C G T C T A G A C T G C T A G T C A G T C A G T A C G C T A G A C T G A C G T A C G T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:7
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GCCGGGAGAGGGA-
----GGAGGGGGAA
 A C T G A G T C A G T C C T A G A C T G A C T G C G T A A T C G C G T A A C T G A C T G A T C G C G T A A C G T
A C G T A C G T A C G T A C G T A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A

KLF5/MA0599.1/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GCCGGGAGAGGGA
--GGGGNGGGGC-
 A C T G A G T C A G T C C T A G A C T G A C T G C G T A A T C G C G T A A C T G A C T G A T C G C G T A
A C G T A C G T C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C A C G T

E2F6/MA0471.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GCCGGGAGAGGGA
GGGCGGGAAGG---
 A C G T A C T G A G T C A G T C C T A G A C T G A C T G C G T A A T C G C G T A A C T G A C T G A T C G C G T A
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T A C G T

EGR1/MA0162.2/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GCCGGGAGAGGGA-
GGCGGGGGCGGGGG
 A C T G A G T C A G T C C T A G A C T G A C T G C G T A A T C G C G T A A C T G A C T G A T C G C G T A A C G T
A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G