Information for 4-GGCGGATCTGGCG (Motif 5)

A T C G A C T G A G T C C T A G A C T G T G C A G A C T A G T C A C G T A T C G A C T G A T G C C A T G
Reverse Opposite:
G T A C A T C G A G T C A T G C T G C A A C T G C G T A A C G T A G T C A G T C A C T G A G T C A T G C
p-value:1e-10
log p-value:-2.498e+01
Information Content per bp:1.791
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.96%
Number of Background Sequences with motif104.8
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets53.9 +/- 26.3bp
Average Position of motif in Background50.8 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL003.1_GC-box/Jaspar

Match Rank:1
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GGCGGATCTGGCG
AGGGGGCGGGGCTG---
 A C G T A C G T A C G T A C G T A T C G A C T G A G T C C T A G A C T G T G C A G A C T A G T C A C G T A T C G A C T G A T G C C A T G
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GGCGGATCTGGCG
AAGGKGRCGCAGGCA
 A C G T A C G T A T C G A C T G A G T C C T A G A C T G T G C A G A C T A G T C A C G T A T C G A C T G A T G C C A T G
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:3
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GGCGGATCTGGCG
RGKGGGCGGAGC-----
 A C G T A C G T A C G T A C G T A T C G A C T G A G T C C T A G A C T G T G C A G A C T A G T C A C G T A T C G A C T G A T G C C A T G
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:4
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GGCGGATCTGGCG-
----GGTCTGGCAT
 A T C G A C T G A G T C C T A G A C T G T G C A G A C T A G T C A C G T A T C G A C T G A T G C C A T G A C G T
A C G T A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

Sp1(Zf)/Promoter/Homer

Match Rank:5
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GGCGGATCTGGCG
GGGGGCGGGGCC----
 A C G T A C G T A C G T A T C G A C T G A G T C C T A G A C T G T G C A G A C T A G T C A C G T A T C G A C T G A T G C C A T G
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T A C G T A C G T

SP2/MA0516.1/Jaspar

Match Rank:6
Score:0.58
Offset:-7
Orientation:reverse strand
Alignment:-------GGCGGATCTGGCG
GGGNGGGGGCGGGGC-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C T G A G T C C T A G A C T G T G C A G A C T A G T C A C G T A T C G A C T G A T G C C A T G
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T A C G T A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:7
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------GGCGGATCTGGCG
NAGANTGGCGGGGNGNA--
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C T G A G T C C T A G A C T G T G C A G A C T A G T C A C G T A T C G A C T G A T G C C A T G
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GGCGGATCTGGCG
GGGGCTYGKCTGGGA
 A C G T A C G T A T C G A C T G A G T C C T A G A C T G T G C A G A C T A G T C A C G T A T C G A C T G A T G C C A T G
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A

YY2/MA0748.1/Jaspar

Match Rank:9
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----GGCGGATCTGGCG
TAATGGCGGNC------
 A C G T A C G T A C G T A C G T A T C G A C T G A G T C C T A G A C T G T G C A G A C T A G T C A C G T A T C G A C T G A T G C C A T G
G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C A C G T A C G T A C G T A C G T A C G T A C G T

SP1/MA0079.3/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GGCGGATCTGGCG
GGGGGCGGGGC-----
 A C G T A C G T A C G T A T C G A C T G A G T C C T A G A C T G T G C A G A C T A G T C A C G T A T C G A C T G A T G C C A T G
T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T A C G T A C G T A C G T A C G T