Information for 2-GACAGCKGGGSRGRGM (Motif 3)

A C T G C G T A A G T C C G T A A T C G A G T C A C G T A C T G A C T G A C T G A T C G C T A G A C T G C T A G A C T G T G A C
Reverse Opposite:
A C T G A G T C A G T C A G T C A G C T T A C G A G T C A G T C A G T C G T C A A C T G A T G C A C G T A C T G A C G T A G T C
p-value:1e-12
log p-value:-2.914e+01
Information Content per bp:1.870
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.3 +/- 22.8bp
Average Position of motif in Background62.2 +/- 20.4bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Myog/MA0500.1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GACAGCKGGGSRGRGM
GACAGCTGCAG-----
 A C T G C G T A A G T C C G T A A T C G A G T C A C G T A C T G A C T G A C T G A T C G C T A G A C T G C T A G A C T G T G A C
T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T A C G T A C G T A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GACAGCKGGGSRGRGM
AACAGCTGCAG-----
 A C T G C G T A A G T C C G T A A T C G A G T C A C G T A C T G A C T G A C T G A T C G C T A G A C T G C T A G A C T G T G A C
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G A C G T A C G T A C G T A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:3
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GACAGCKGGGSRGRGM
NAACAGCTGG-------
 A C G T A C T G C G T A A G T C C G T A A T C G A G T C A C G T A C T G A C T G A C T G A T C G C T A G A C T G C T A G A C T G T G A C
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:4
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GACAGCKGGGSRGRGM
AACAGCTG--------
 A C T G C G T A A G T C C G T A A T C G A G T C A C G T A C T G A C T G A C T G A T C G C T A G A C T G C T A G A C T G T G A C
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GACAGCKGGGSRGRGM
NGNGACAGCTGCN------
 A C G T A C G T A C G T A C T G C G T A A G T C C G T A A T C G A G T C A C G T A C T G A C T G A C T G A T C G C T A G A C T G C T A G A C T G T G A C
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:6
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------GACAGCKGGGSRGRGM
GATATTGACAGCTGCGT-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G T A A T C G A G T C A C G T A C T G A C T G A C T G A T C G C T A G A C T G C T A G A C T G T G A C
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T A C G T A C G T A C G T A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GACAGCKGGGSRGRGM
-HCAGCTGDTN-----
 A C T G C G T A A G T C C G T A A T C G A G T C A C G T A C T G A C T G A C T G A T C G C T A G A C T G C T A G A C T G T G A C
A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GACAGCKGGGSRGRGM
CACAGCAGGGGG----
 A C T G C G T A A G T C C G T A A T C G A G T C A C G T A C T G A C T G A C T G A T C G C T A G A C T G C T A G A C T G T G A C
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T A C G T

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.62
Offset:7
Orientation:forward strand
Alignment:GACAGCKGGGSRGRGM
-------GGGGGGGG-
 A C T G C G T A A G T C C G T A A T C G A G T C A C G T A C T G A C T G A C T G A T C G C T A G A C T G C T A G A C T G T G A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G C T A G T C A G T C A G T A C G C T A G A C T G A C G T

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GACAGCKGGGSRGRGM
-ACAGCTGTTN-----
 A C T G C G T A A G T C C G T A A T C G A G T C A C G T A C T G A C T G A C T G A T C G C T A G A C T G C T A G A C T G T G A C
A C G T T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A G T C A C G T A C G T A C G T A C G T A C G T