Information for 6-GGAATTTCCT (Motif 20)

C T A G A C T G T G C A G T C A C G A T A C G T A C G T A G T C A G T C C G A T
Reverse Opposite:
C G T A A C T G C T A G C G T A C G T A C G T A A C G T A C G T A G T C A G T C
p-value:1e-3
log p-value:-8.515e+00
Information Content per bp:1.867
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif46.7
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets66.5 +/- 16.4bp
Average Position of motif in Background45.9 +/- 24.8bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.90
Offset:-1
Orientation:reverse strand
Alignment:-GGAATTTCCT
GGGAATTTCC-
 A C G T C T A G A C T G T G C A G T C A C G A T A C G T A C G T A G T C A G T C C G A T
A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.89
Offset:-1
Orientation:forward strand
Alignment:-GGAATTTCCT
GGGAATTTCC-
 A C G T C T A G A C T G T G C A G T C A C G A T A C G T A C G T A G T C A G T C C G A T
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T

REL/MA0101.1/Jaspar

Match Rank:3
Score:0.84
Offset:-1
Orientation:forward strand
Alignment:-GGAATTTCCT
GGGGATTTCC-
 A C G T C T A G A C T G T G C A G T C A C G A T A C G T A C G T A G T C A G T C C G A T
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T

MF0003.1_REL_class/Jaspar

Match Rank:4
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-GGAATTTCCT
GGGGATTTCC-
 A C G T C T A G A C T G T G C A G T C A C G A T A C G T A C G T A G T C A G T C C G A T
A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:5
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--GGAATTTCCT
NGGGGATTTCCC
 A C G T A C G T C T A G A C T G T G C A G T C A C G A T A C G T A C G T A G T C A G T C C G A T
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.78
Offset:3
Orientation:forward strand
Alignment:GGAATTTCCT---
---ATTTCCTGTN
 C T A G A C T G T G C A G T C A C G A T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:GGAATTTCCT---
---ATTTCCTGTN
 C T A G A C T G T G C A G T C A C G A T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A A G C T A C G T A C G T A G T C A G T C A C G T A C T G G A C T A C G T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:8
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:GGAATTTCCT---
---ACTTCCTGNT
 C T A G A C T G T G C A G T C A C G A T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A C T G G C A T

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:9
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:GGAATTTCCT---
---ACTTCCTGBT
 C T A G A C T G T G C A G T C A C G A T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A A G T C A C G T A C G T A G T C A G T C A C G T A T C G A T C G G C A T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:10
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GGAATTTCCT---
-NNAYTTCCTGHN
 C T A G A C T G T G C A G T C A C G A T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C G T
A C G T A T G C A G T C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G G A C T A C G T