Information for 1-GGTGAGTGACAGG (Motif 2)

A C T G A C T G A C G T A C T G C T G A A C T G A C G T A C T G C G T A A G T C C G T A A C T G A C T G
Reverse Opposite:
G T A C A G T C A C G T A C T G G A C T A G T C C G T A A G T C A G C T A G T C C G T A A G T C A G T C
p-value:1e-13
log p-value:-3.081e+01
Information Content per bp:1.914
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets76.5 +/- 25.3bp
Average Position of motif in Background74.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:1
Score:0.83
Offset:2
Orientation:reverse strand
Alignment:GGTGAGTGACAGG-
--TGAGTGACAGSC
 A C T G A C T G A C G T A C T G C T G A A C T G A C G T A C T G C G T A A G T C C G T A A C T G A C T G A C G T
A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.83
Offset:1
Orientation:reverse strand
Alignment:GGTGAGTGACAGG
-NTGATTGACAGN
 A C T G A C T G A C G T A C T G C T G A A C T G A C G T A C T G C G T A A G T C C G T A A C T G A C T G
A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:3
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:GGTGAGTGACAGG
-BTGABTGACAGS
 A C T G A C T G A C G T A C T G C T G A A C T G A C G T A C T G C G T A A G T C C G T A A C T G A C T G
A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GGTGAGTGACAGG
AGGTGNCAGACAG-
 A C G T A C T G A C T G A C G T A C T G C T G A A C T G A C G T A C T G C G T A A G T C C G T A A C T G A C T G
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:5
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:GGTGAGTGACAGG-
----VBTGWCAGCB
 A C T G A C T G A C G T A C T G C T G A A C T G A C G T A C T G C G T A A G T C C G T A A C T G A C T G A C G T
A C G T A C G T A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C

MEIS3/MA0775.1/Jaspar

Match Rank:6
Score:0.64
Offset:5
Orientation:forward strand
Alignment:GGTGAGTGACAGG
-----TTGACAGG
 A C T G A C T G A C G T A C T G C T G A A C T G A C G T A C T G C G T A A G T C C G T A A C T G A C T G
A C G T A C G T A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G

MEIS2/MA0774.1/Jaspar

Match Rank:7
Score:0.63
Offset:5
Orientation:forward strand
Alignment:GGTGAGTGACAGG
-----TTGACAGC
 A C T G A C T G A C G T A C T G C T G A A C T G A C G T A C T G C G T A A G T C C G T A A C T G A C T G
A C G T A C G T A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

PH0141.1_Pknox2/Jaspar

Match Rank:8
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GGTGAGTGACAGG-----
--NNATTGACAGGTGCTT
 A C T G A C T G A C G T A C T G C T G A A C T G A C G T A C T G C G T A A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GGTGAGTGACAGG
CAGGTAAGTAT----
 A C G T A C G T A C T G A C T G A C G T A C T G C T G A A C T G A C G T A C T G C G T A A G T C C G T A A C T G A C T G
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T A C G T A C G T A C G T A C G T

PH0140.1_Pknox1/Jaspar

Match Rank:10
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GGTGAGTGACAGG-----
--GGATTGACAGGTCNTT
 A C T G A C T G A C G T A C T G C T G A A C T G A C G T A C T G C G T A A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C T G A C T G C G T A C G A T A C G T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A C G T G A C T G C A T