Information for 5-CAGTTTGGGA (Motif 19)

A G T C C G T A A C T G A C G T A C G T A C G T A C T G A C T G C T A G C G T A
Reverse Opposite:
A C G T A G T C A G T C A G T C C G T A C G T A C G T A A G T C A C G T A C T G
p-value:1e-5
log p-value:-1.233e+01
Information Content per bp:1.958
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif13.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets47.6 +/- 18.1bp
Average Position of motif in Background47.6 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:1
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CAGTTTGGGA
BRRCVGTTDN---
 A C G T A C G T A C G T A G T C C G T A A C T G A C G T A C G T A C G T A C T G A C T G C T A G C G T A
A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G A C G T A C G T A C G T

PB0150.1_Mybl1_2/Jaspar

Match Rank:2
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----CAGTTTGGGA
CACGGCAGTTGGTNN
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C G T A C G T A C G T A C T G A C T G C T A G C G T A
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G

Myb/MA0100.2/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CAGTTTGGGA
TGGCAGTTGN---
 A C G T A C G T A C G T A G T C C G T A A C T G A C G T A C G T A C G T A C T G A C T G C T A G C G T A
C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G A C G T A C G T A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:4
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CAGTTTGGGA
TGGCAGTTGG---
 A C G T A C G T A C G T A G T C C G T A A C T G A C G T A C G T A C G T A C T G A C T G C T A G C G T A
G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T A C G T A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:5
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------CAGTTTGGGA
NNNTGGCAGTTGGTNN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C G T A C G T A C G T A C T G A C T G C T A G C G T A
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

NFIA/MA0670.1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CAGTTTGGGA--
--NNTTGGCANN
 A G T C C G T A A C T G A C G T A C G T A C G T A C T G A C T G C T A G C G T A A C G T A C G T
A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

PB0034.1_Irf4_1/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CAGTTTGGGA---
TNTGGTTTCGATACN
 A C G T A C G T A G T C C G T A A C T G A C G T A C G T A C G T A C T G A C T G C T A G C G T A A C G T A C G T A C G T
G C A T A C G T G A C T C T A G A T C G C G A T C G A T A C G T A G T C C T A G C T G A G C A T G C T A G A T C A C T G

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CAGTTTGGGA
----TTGGCA
 A G T C C G T A A C T G A C G T A C G T A C G T A C T G A C T G C T A G C G T A
A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

PB0029.1_Hic1_1/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CAGTTTGGGA----
NGTAGGTTGGCATNNN
 A C G T A C G T A G T C C G T A A C T G A C G T A C G T A C G T A C T G A C T G C T A G C G T A A C G T A C G T A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CAGTTTGGGA
TGTCGGTT-----
 A C G T A C G T A C G T A G T C C G T A A C T G A C G T A C G T A C G T A C T G A C T G C T A G C G T A
C G A T C A T G C G A T G A T C T C A G A T C G G C A T G C A T A C G T A C G T A C G T A C G T A C G T