Information for 6-CAGCCACGGAGCCAGG (Motif 16)

A T G C G T C A T A C G A G T C A T G C C T G A A G T C T A C G A T C G G T C A A T C G G T A C A G T C G T C A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A C T G C A T G A T G C A C G T A T G C A T G C T A C G G A C T T A C G A C T G A T G C A C G T A T C G
p-value:1e-7
log p-value:-1.647e+01
Information Content per bp:1.780
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif19.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets46.7 +/- 30.1bp
Average Position of motif in Background56.2 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CAGCCACGGAGCCAGG---
YCAGGCWCAGTACCAGGCTC
 A C G T A T G C G T C A T A C G A G T C A T G C C T G A A G T C T A C G A T C G G T C A A T C G G T A C A G T C G T C A A C T G A C T G A C G T A C G T A C G T
A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CAGCCACGGAGCCAGG
CAGCC-----------
 A T G C G T C A T A C G A G T C A T G C C T G A A G T C T A C G A T C G G T C A A T C G G T A C A G T C G T C A A C T G A C T G
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:CAGCCACGGAGCCAGG
------CGGAGC----
 A T G C G T C A T A C G A G T C A T G C C T G A A G T C T A C G A T C G G T C A A T C G G T A C A G T C G T C A A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:4
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-CAGCCACGGAGCCAGG
TGACCCAGTGACCTAC-
 A C G T A T G C G T C A T A C G A G T C A T G C C T G A A G T C T A C G A T C G G T C A A T C G G T A C A G T C G T C A A C T G A C T G
G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.47
Offset:0
Orientation:reverse strand
Alignment:CAGCCACGGAGCCAGG
TTGGCANNNTGCCAAG
 A T G C G T C A T A C G A G T C A T G C C T G A A G T C T A C G A T C G G T C A A T C G G T A C A G T C G T C A A C T G A C T G
G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:6
Score:0.47
Offset:1
Orientation:reverse strand
Alignment:CAGCCACGGAGCCAGG
-TGGCAGNCTGCCAG-
 A T G C G T C A T A C G A G T C A T G C C T G A A G T C T A C G A T C G G T C A A T C G G T A C A G T C G T C A A C T G A C T G
A C G T C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:7
Score:0.47
Offset:11
Orientation:forward strand
Alignment:CAGCCACGGAGCCAGG-----
-----------VCAGGTRDRY
 A T G C G T C A T A C G A G T C A T G C C T G A A G T C T A C G A T C G G T C A A T C G G T A C A G T C G T C A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:8
Score:0.46
Offset:3
Orientation:reverse strand
Alignment:CAGCCACGGAGCCAGG--
---SCAGYCADGCATGAC
 A T G C G T C A T A C G A G T C A T G C C T G A A G T C T A C G A T C G G T C A A T C G G T A C A G T C G T C A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

SP4/MA0685.1/Jaspar

Match Rank:9
Score:0.46
Offset:-1
Orientation:forward strand
Alignment:-CAGCCACGGAGCCAGG
TAAGCCACGCCCCCTTT
 A C G T A T G C G T C A T A C G A G T C A T G C C T G A A G T C T A C G A T C G G T C A A T C G G T A C A G T C G T C A A C T G A C T G
A G C T G C T A C T G A C T A G G T A C A G T C T G C A G T A C A C T G T A G C T G A C A G T C G T A C G A T C G C A T G A C T G A C T

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:10
Score:0.46
Offset:2
Orientation:forward strand
Alignment:CAGCCACGGAGCCAGG
--GCCACRCCCACY--
 A T G C G T C A T A C G A G T C A T G C C T G A A G T C T A C G A T C G G T C A A T C G G T A C A G T C G T C A A C T G A C T G
A C G T A C G T T C A G T G A C G T A C T G C A G T A C C T A G G T A C A T G C A G T C G T C A A G T C G A C T A C G T A C G T