Information for 5-GGGCAATGGCAAGGCA (Motif 15)

A C T G A C T G A C T G A G T C C G T A C G T A A C G T A C T G A C T G A G T C C G T A C G T A A C T G A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C A G T C A C G T A C G T A C T G A G T C A G T C C G T A A C G T A C G T A C T G A G T C A G T C A G T C
p-value:1e-7
log p-value:-1.658e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets70.8 +/- 14.2bp
Average Position of motif in Background37.3 +/- 21.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GGGCAATGGCAAGGCA
TAGGGCAAAGGTCA----
 A C G T A C G T A C T G A C T G A C T G A G T C C G T A C G T A A C G T A C T G A C T G A G T C C G T A C G T A A C T G A C T G A G T C C G T A
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T A C G T A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:2
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GGGCAATGGCAAGGCA
AGGTCAAGGTCA-----
 A C G T A C T G A C T G A C T G A G T C C G T A C G T A A C G T A C T G A C T G A G T C C G T A C G T A A C T G A C T G A G T C C G T A
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GGGCAATGGCAAGGCA
TGGGGCAAAGGTCA----
 A C G T A C G T A C T G A C T G A C T G A G T C C G T A C G T A A C G T A C T G A C T G A G T C C G T A C G T A A C T G A C T G A G T C C G T A
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:4
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GGGCAATGGCAAGGCA
GTAGGGCAAAGGTCA----
 A C G T A C G T A C G T A C T G A C T G A C T G A G T C C G T A C G T A A C G T A C T G A C T G A G T C C G T A C G T A A C T G A C T G A G T C C G T A
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T A C G T A C G T

ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GGGCAATGGCAAGGCA---------
RGGCAMTAGGGAGCCATRGAAGGTK
 A C T G A C T G A C T G A G T C C G T A C G T A A C G T A C T G A C T G A G T C C G T A C G T A A C T G A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C T A G C T A G A G T C T C G A T G C A G A C T C T G A A C T G A C T G A C T G C G T A A C T G A G T C G A T C C G T A A G C T C T A G A T C G G T C A C T G A C T A G T C A G A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.52
Offset:5
Orientation:forward strand
Alignment:GGGCAATGGCAAGGCA
-----TTGCCAAG---
 A C T G A C T G A C T G A G T C C G T A C G T A A C G T A C T G A C T G A G T C C G T A C G T A A C T G A C T G A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GGGCAATGGCAAGGCA
GAACAATGGN------
 A C T G A C T G A C T G A G T C C G T A C G T A A C G T A C T G A C T G A G T C C G T A C G T A A C T G A C T G A G T C C G T A
C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:8
Score:0.51
Offset:3
Orientation:forward strand
Alignment:GGGCAATGGCAAGGCA
---CAAGGHCANV---
 A C T G A C T G A C T G A G T C C G T A C G T A A C G T A C T G A C T G A G T C C G T A C G T A A C T G A C T G A G T C C G T A
A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:9
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GGGCAATGGCAAGGCA-
RGGTCADNNAGAGGTCAV
 A C G T A C T G A C T G A C T G A G T C C G T A C G T A A C G T A C T G A C T G A G T C C G T A C G T A A C T G A C T G A G T C C G T A A C G T
C T G A C A T G A C T G A C G T A T G C C G T A C A T G T A C G A T G C G C T A T A C G C T G A C T A G A C T G A C G T A T G C C G T A T A G C

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:10
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GGGCAATGGCAAGGCA
RAACAATGGN------
 A C T G A C T G A C T G A G T C C G T A C G T A A C G T A C T G A C T G A G T C C G T A C G T A A C T G A C T G A G T C C G T A
C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T