Information for 1-GACWHAVAGT (Motif 2)

A C T G C G T A A G T C C G A T G T A C C G T A T C A G C T G A A T C G A C G T
Reverse Opposite:
C G T A A T G C A G C T A G T C C G A T C A T G C G T A A C T G A C G T G T A C
p-value:1e-10
log p-value:-2.439e+01
Information Content per bp:1.759
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif4.13%
Number of Background Sequences with motif210.9
Percentage of Background Sequences with motif0.43%
Average Position of motif in Targets50.6 +/- 20.6bp
Average Position of motif in Background50.0 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOS::JUN/MA0099.2/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GACWHAVAGT
TGACTCA----
 A C G T A C T G C G T A A G T C C G A T G T A C C G T A T C A G C T G A A T C G A C G T
A G C T A C T G G T C A T G A C C G A T A T G C C G T A A C G T A C G T A C G T A C G T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GACWHAVAGT----
GVACAGNMTGTYCTB
 A C G T A C T G C G T A A G T C C G A T G T A C C G T A T C A G C T G A A T C G A C G T A C G T A C G T A C G T A C G T
C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GACWHAVAGT----
GRACAGWMTGTYCTB
 A C G T A C T G C G T A A G T C C G A T G T A C C G T A T C A G C T G A A T C G A C G T A C G T A C G T A C G T A C G T
C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G

MEIS1/MA0498.2/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GACWHAVAGT
TTGACAG-----
 A C G T A C G T A C T G C G T A A G T C C G A T G T A C C G T A T C A G C T G A A T C G A C G T
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T A C G T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GACWHAVAGT---
NAGNACANNNTGTNCT
 A C G T A C G T A C G T A C T G C G T A A G T C C G A T G T A C C G T A T C A G C T G A A T C G A C G T A C G T A C G T A C G T
T A C G C T G A C T A G T C G A C G T A A G T C C T G A A T C G G C A T T A G C G A C T A C T G A C G T A G C T A G T C G A C T

JUNB/MA0490.1/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GACWHAVAGT
GGATGACTCAT---
 A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G A T G T A C C G T A T C A G C T G A A T C G A C G T
C A T G C T A G T C G A A C G T A C T G C G T A A T G C A C G T G T A C C G T A A C G T A C G T A C G T A C G T

FOSL2/MA0478.1/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GACWHAVAGT
GGATGACTCAT---
 A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G A T G T A C C G T A T C A G C T G A A T C G A C G T
A C T G T C A G C T G A A C G T A C T G T C G A A T G C A C G T G T A C C G T A A C G T A C G T A C G T A C G T

FOSL1/MA0477.1/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GACWHAVAGT
GGTGACTCATG--
 A C G T A C G T A C G T A C T G C G T A A G T C C G A T G T A C C G T A T C A G C T G A A T C G A C G T
C T A G T C A G A C G T A C T G C G T A T A G C A C G T G T A C C G T A A C G T T A C G A C G T A C G T

JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer

Match Rank:9
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GACWHAVAGT
RATGASTCAT---
 A C G T A C G T A C G T A C T G C G T A A G T C C G A T G T A C C G T A T C A G C T G A A T C G A C G T
C T A G T C G A G C A T C A T G G C T A T A G C C G A T G T A C C T G A A G C T A C G T A C G T A C G T

BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GACWHAVAGT
ATGASTCATH--
 A C G T A C G T A C T G C G T A A G T C C G A T G T A C C G T A T C A G C T G A A T C G A C G T
T G C A A C G T A C T G C G T A T A G C C G A T G T A C C G T A A C G T G T C A A C G T A C G T