Information for 3-CTTGTCCTTGGCCTGC (Motif 9)

A G T C C G A T A C G T A C T G A C G T G T A C A G T C A C G T A C G T A C T G A C T G A G T C A G T C C G A T A C T G A G T C
Reverse Opposite:
A C T G T G A C C G T A A C T G A C T G A G T C A G T C C G T A T G C A A C T G A C T G C G T A A G T C C G T A C G T A A C T G
p-value:1e-8
log p-value:-2.007e+01
Information Content per bp:1.928
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.10%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.2 +/- 10.2bp
Average Position of motif in Background66.6 +/- 33.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:1
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:CTTGTCCTTGGCCTGC
--TGACCTTGACCT--
 A G T C C G A T A C G T A C T G A C G T G T A C A G T C A C G T A C G T A C T G A C T G A G T C A G T C C G A T A C T G A G T C
A C G T A C G T G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:2
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CTTGTCCTTGGCCTGC
--TGACCTTGACCT--
 A G T C C G A T A C G T A C T G A C G T G T A C A G T C A C G T A C G T A C T G A C T G A G T C A G T C C G A T A C T G A G T C
A C G T A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CTTGTCCTTGGCCTGC
BNTGDCCTTG------
 A G T C C G A T A C G T A C T G A C G T G T A C A G T C A C G T A C G T A C T G A C T G A G T C A G T C C G A T A C T G A G T C
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:4
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CTTGTCCTTGGCCTGC
--TGACCTTGAV----
 A G T C C G A T A C G T A C T G A C G T G T A C A G T C A C G T A C G T A C T G A C T G A G T C A G T C C G A T A C T G A G T C
A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:5
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CTTGTCCTTGGCCTGC
--TGACCTTGAN----
 A G T C C G A T A C G T A C T G A C G T G T A C A G T C A C G T A C G T A C T G A C T G A G T C A G T C C G A T A C T G A G T C
A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CTTGTCCTTGGCCTGC
GCTGACCTTGAACTN-
 A G T C C G A T A C G T A C T G A C G T G T A C A G T C A C G T A C G T A C T G A C T G A G T C A G T C C G A T A C T G A G T C
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CTTGTCCTTGGCCTGC
-GGGGCCGAGGCCTG-
 A G T C C G A T A C G T A C T G A C G T G T A C A G T C A C G T A C G T A C T G A C T G A G T C A G T C C G A T A C T G A G T C
A C G T A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CTTGTCCTTGGCCTGC
GAGCCTGGTACTGWGCCTGR
 A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C T G A C G T G T A C A G T C A C G T A C G T A C T G A C T G A G T C A G T C C G A T A C T G A G T C
T A C G C T G A C A T G G A T C G T A C G C A T T C A G T A C G A G C T G T C A G A T C G C A T T A C G C G T A C T A G G A T C G A T C C G A T A C T G T C A G

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CTTGTCCTTGGCCTGC
-NTGACCTTGA-----
 A G T C C G A T A C G T A C T G A C G T G T A C A G T C A C G T A C G T A C T G A C T G A G T C A G T C C G A T A C T G A G T C
A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTTGTCCTTGGCCTGC
-CTGACCTTTG-----
 A G T C C G A T A C G T A C T G A C G T G T A C A G T C A C G T A C G T A C T G A C T G A G T C A G T C C G A T A C T G A G T C
A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T A C G T A C G T