Information for 4-GCGCAGCCCGGGC (Motif 5)

A T C G T A G C A T C G A T G C C T G A T A C G G A T C A T G C T A G C A T C G A T C G A T C G T G A C
Reverse Opposite:
A C T G A T G C A T G C A T G C A T C G T A C G C T A G A T G C G A C T A T C G A T G C A T C G A T G C
p-value:1e-9
log p-value:-2.169e+01
Information Content per bp:1.756
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif6.34%
Number of Background Sequences with motif612.2
Percentage of Background Sequences with motif1.25%
Average Position of motif in Targets49.4 +/- 24.3bp
Average Position of motif in Background51.8 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0199.1_Zfp161_2/Jaspar

Match Rank:1
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GCGCAGCCCGGGC
GCCGCGCAGTGCGT--
 A C G T A C G T A C G T A T C G T A G C A T C G A T G C C T G A T A C G G A T C A T G C T A G C A T C G A T C G A T C G T G A C
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T A C G T A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GCGCAGCCCGGGC----
---ATGCCCGGGCATGT
 A T C G T A G C A T C G A T G C C T G A T A C G G A T C A T G C T A G C A T C G A T C G A T C G T G A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T

ZIC3/MA0697.1/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCGCAGCCCGGGC--
NCGCAGCGGGGGGTC
 A T C G T A G C A T C G A T G C C T G A T A C G G A T C A T G C T A G C A T C G A T C G A T C G T G A C A C G T A C G T
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GCGCAGCCCGGGC
---GAGSCCGAGC
 A T C G T A G C A T C G A T G C C T G A T A C G G A T C A T G C T A G C A T C G A T C G A T C G T G A C
A C G T A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GCGCAGCCCGGGC--
DCHCAGCAGGRGGCC
 A T C G T A G C A T C G A T G C C T G A T A C G G A T C A T G C T A G C A T C G A T C G A T C G T G A C A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

ZIC1/MA0696.1/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GCGCAGCCCGGGC--
-CACAGCGGGGGGTC
 A T C G T A G C A T C G A T G C C T G A T A C G G A T C A T G C T A G C A T C G A T C G A T C G T G A C A C G T A C G T
A C G T T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

PB0206.1_Zic2_2/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GCGCAGCCCGGGC
CCACACAGCAGGAGA
 A C G T A C G T A T C G T A G C A T C G A T G C C T G A T A C G G A T C A T G C T A G C A T C G A T C G A T C G T G A C
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

ZIC4/MA0751.1/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GCGCAGCCCGGGC--
NCNCAGCGGGGGGTC
 A T C G T A G C A T C G A T G C C T G A T A C G G A T C A T G C T A G C A T C G A T C G A T C G T G A C A C G T A C G T
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C

Zfx/MA0146.2/Jaspar

Match Rank:9
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GCGCAGCCCGGGC---
--GGGGCCGAGGCCTG
 A T C G T A G C A T C G A T G C C T G A T A C G G A T C A T G C T A G C A T C G A T C G A T C G T G A C A C G T A C G T A C G T
A C G T A C G T A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

NRF1/MA0506.1/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GCGCAGCCCGGGC
TGCGCAGGCGC---
 A C G T A T C G T A G C A T C G A T G C C T G A T A C G G A T C A T G C T A G C A T C G A T C G A T C G T G A C
A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C A C G T A C G T A C G T